Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2224 |
Symbol | |
ID | 6315402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2361572 |
End bp | 2363074 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642644612 |
Product | diguanylate cyclase and metal dependent phosphohydrolase |
Protein accession | YP_001918378 |
Protein GI | 188586833 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000178543 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 1.10821e-21 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGGCGGGAA AGGAAGATAA GTTTATGGGA GATGGTGGCT TTACTGGCAA AGATGAAAAT TTGGATAGTA GGAATTATCA GGAGCTTTAC TGGGTACACA AAAGCTATTA TGAACAGCTC TTTAAGCATA TGCCCGATGG TATTGCTCTG GTAGATCAAG ACAATAAAGT GATAGATGTC AATCCAGTCT TTGAAAAAAT TTTTGGTTAT GATAAAGATG AAATTATTGG TGAAAATTTA GATTGTATGA TTACCACACC AGAACTTTCT AAGGAAGCCG AAACCCTATC AAGTATGGCC CAAAAAGGCA TGGTGGTTAA CCGATCCAGT CAGAGGATAA GAAAGGACGG TAAACCAGTA TTTGTGAAAA TTACAGGTAT GCCATTAGTT ATCAATGATA AAATGGCAGG AGGTTTTGGA ATTTATCAGG ATATCACCGA GGAAAAGCTG GCCAAGGAAC GTTTGGAATA CTTAAATAAT AGGGACAAGC TCACAGGTAC TTATCACCGT CAGTATGTGG AGAATATGAT CTATGAGCTA GAGAAAAACA ATGTTCCCGT AAGTTTTATT TTAGGTGATA TCAATGACTT GAAACTGGTA AATGAGGTCT TCGGTCACCT GGAAGGGAAT AAGGTCTTGC AAAGGACTGT TAGGATCTTA AAATCCGTAC TTCCTCATGA CGCCATTATA TCCAGGTGGA GTGGTGACGA GTTCTTAATA GTACTTACTG AAACGGGTGA ATTAGAAGTT CAGCAGTGGC TCAAAAAACT TCGAGAGGCC TTTGAATGGG AAAATATAAA TAAAAGGGAC AAGTTTCCCG TGATTTTATC CTTTGGATAT GCAACCCGGA TTGGTGATGG TAGACCTGTT CGGGAAGTAC TCAAAAAGGC CGATGACAGG ATGCAGCGCC AGAAATCTTT GAGCAGTCGC AGATTGAAAG GTGCTTCTGT AGAATTTCTC AAGCGCATGA TGCCTGAGAA ATGTTCGGAA ACTGTAGAAC ATACTACTAG AATGAAACAT ATAGCCAGGA TGATGGGAGA GGCCCTATAT CTTTCTGAAG CTGCCTTGGA TGAGTTAGAA CTAATTGCAT CCTTACACGA TATTGGTAAA ATTGCCGTCC CGGAGAACAT TTTATTGAAG GAAGGCCCCC TTGATGAAGA AGAATGGCAT GAAATCAAGA AACATCCAGA AATCGGATGT CGAATTGCCC AGTCCATGGA AGAACTTCGG CCAGTAGCCG AAGGTATTTT GTACCATCAC GAATGGATTA ACGGCAGGGG TTATCCCACA GGCCTTCAAG GTAGGGAGAT TCCCCTGGTG GCCCGGGTGA TTTCCATTGT GGATGCCTAT GAAGTCATGA CCAGGGGTAG GCCCTATAAG GGTCCGGTAA CGCCCCAAAA TGCCAGGGAA GAGCTAAAAA ATTCTGCCGG AACCCAGTTT GACCCGGATT TGGTAGAACT CTTTTCTGAA GAGATCTTTC CAAAAATAAA GGAAAAATTT TAA
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Protein sequence | MAGKEDKFMG DGGFTGKDEN LDSRNYQELY WVHKSYYEQL FKHMPDGIAL VDQDNKVIDV NPVFEKIFGY DKDEIIGENL DCMITTPELS KEAETLSSMA QKGMVVNRSS QRIRKDGKPV FVKITGMPLV INDKMAGGFG IYQDITEEKL AKERLEYLNN RDKLTGTYHR QYVENMIYEL EKNNVPVSFI LGDINDLKLV NEVFGHLEGN KVLQRTVRIL KSVLPHDAII SRWSGDEFLI VLTETGELEV QQWLKKLREA FEWENINKRD KFPVILSFGY ATRIGDGRPV REVLKKADDR MQRQKSLSSR RLKGASVEFL KRMMPEKCSE TVEHTTRMKH IARMMGEALY LSEAALDELE LIASLHDIGK IAVPENILLK EGPLDEEEWH EIKKHPEIGC RIAQSMEELR PVAEGILYHH EWINGRGYPT GLQGREIPLV ARVISIVDAY EVMTRGRPYK GPVTPQNARE ELKNSAGTQF DPDLVELFSE EIFPKIKEKF
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