| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2187 |
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| Symbol | |
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| ID | 6317054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 2319138 |
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| End bp | 2320919 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642644574 |
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| Product | diguanylate cyclase and metal dependent phosphohydrolase |
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| Protein accession | YP_001918341 |
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| Protein GI | 188586796 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.1316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGCTA ATTCAAATAA TAATCACAAT CAAATAAAAG GAATATTAAA TTCTTTAAGT
GCTAATATTT GTCTCTTGGA TGAAAATGGA GTCATAGAAC AGGTTAATGA TTCCTGGTTA
AATTTTGCCA AGCGTAATAA TGGTGATTTA AAAAAAAATG GCCAAGGAAT AAATTATTTA
TCCGTGTGTT ATAAAGCTGT TGAAAATGGC TGCGAAAGTG CCAGTTTTTT TATTGATGGC
CTTTGTTCTG TGATGAACAA TGAAAGGGAT TATTTTGAAT TTGAATATCC CTGTCATTCA
CCGGATGTAG AACGATGGTT TATCTGTCGA GTAACTCCTT ATTATGAAAC AATTTATACT
TCATTAAAAC GCAAAGTAGT AGTTGCTCAT GAAGATATTA CAAAAAGAAA ACAGGCAGAA
AAATGGTTAG AATCCTTGTA TAAAAATTCC TCAGATGGAG TTATACAAGT AGATAATGAG
AATAAAGTTA TAGATATTAA TGAAAAATTC CATGAATTAT TTGGATATTG TATTTATGAA
ATTAAATGGA AAAATATATT TGATGTATTA AAAATTGACA TAGCGAATAA AGAGCAAACC
AGTCATGGAG AAACTAATAT TACTGCGGAA ATAACTTGTT ATAGTAAAAC AGATAAACCG
GTAGATGTGT TACTTAAAAT AATTCCAGTT CAAATAAAAG AGGAGTTAGT AGGGAATTAT
GTGATCTTCA ATGATATAAC TGAACGTAAA AAGAAAGAAG AAGAAATTCG GTATTTAAGC
ATCCATGATA GTTTAACAAG CCTCTATAAT CGCGCTTATT TAGAAAAAGA ATTAACACGA
CTTGATGTAA AAACACAACT TCCAATCAGT ATAATTATAG CGGATGTAAA TGGTTTAAAA
TTAATCAATG ACACATATGG TCATCAAGTT GGGGACAGGG CCTTGAAGCG TGTAGCTGAT
GCTTTAAGAA AAGCTTGTAG AAAAGAAGAT ATTATTTCTC GGTGGGGTGG AGATGAGTTT
GTCATACTGT TACCAAAAAC AAATAAACAA GCTGCTAATC AAATAGCGGA AAGGATTAGA
GAAGTAAGTG AAAATATTGT TAAAAAATCA ATTAAGGTAA ACTTTGCAGT AGGTACAGCC
ACAAAAGAAA ACATAGATAA ACCCTTTAAA GAAATTTTCA AAGAAGCAGA AGATTCAATG
TATAAGAATA AATTAGTTGA AGATTCGAGT GTCAGAAATG ACATTATATC TATCTTATTA
GGAACATTAA AAGAAAATAG TGGTGAAACA GAGGAACATG CTAAGAGAAT GAGAGATCTA
TGTTATGAAT TTGGAAAAGC TTTGGGTTTA GATGAAGATG AATTATGCAG ACTGTCCCTA
TTGGCGACAA TGCACGATAT AGGTAAAGTA ATTATATCAT CTGATATATT AAAAAAACGT
GGACCATTGA CAGAAAAAGA ATGGCATCTT ATTAAAAAAC ATCCTGAAGT TGGCAAACGT
ATAGCTTTAA ACTCAAACAA TTTATGTCAC ATTGCTGAGG AGATTAATTC TCACCATGAA
AGATGGGATG GCGACGGCTA TCCCAATGGA TTAAAGGGTG AAGAGATTCC GTTACTGGCA
AGGATATTAT TGATCGTTGA TGCTTATGAT GCTATGACTC ATGGTAGGAC CTATAAAAAA
CCTGTTTCCC AACAAACAGC ACTATCAGAA ATTAAAAGAT GTGCTGGAAC TCAATTCGAT
CCTGGTTTGG TAGAAGTTTT TTTGAAGATC ATGACACGCT GA
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| Protein sequence | MSANSNNNHN QIKGILNSLS ANICLLDENG VIEQVNDSWL NFAKRNNGDL KKNGQGINYL
SVCYKAVENG CESASFFIDG LCSVMNNERD YFEFEYPCHS PDVERWFICR VTPYYETIYT
SLKRKVVVAH EDITKRKQAE KWLESLYKNS SDGVIQVDNE NKVIDINEKF HELFGYCIYE
IKWKNIFDVL KIDIANKEQT SHGETNITAE ITCYSKTDKP VDVLLKIIPV QIKEELVGNY
VIFNDITERK KKEEEIRYLS IHDSLTSLYN RAYLEKELTR LDVKTQLPIS IIIADVNGLK
LINDTYGHQV GDRALKRVAD ALRKACRKED IISRWGGDEF VILLPKTNKQ AANQIAERIR
EVSENIVKKS IKVNFAVGTA TKENIDKPFK EIFKEAEDSM YKNKLVEDSS VRNDIISILL
GTLKENSGET EEHAKRMRDL CYEFGKALGL DEDELCRLSL LATMHDIGKV IISSDILKKR
GPLTEKEWHL IKKHPEVGKR IALNSNNLCH IAEEINSHHE RWDGDGYPNG LKGEEIPLLA
RILLIVDAYD AMTHGRTYKK PVSQQTALSE IKRCAGTQFD PGLVEVFLKI MTR
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