Gene Nther_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2019 
Symbol 
ID6315874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2129349 
End bp2130377 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content37% 
IMG OID642644407 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_001918174 
Protein GI188586629 
COG category[K] Transcription 
COG ID[COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG AGTGGGACTT ACTTCTCAAA CTCACACCAG AGCTAACTGA AGTTGCAGAA 
AAAAGGTATA AAATTCTTGC TAATATATCT TATTATCAAC CTGTCGGTCG AAGAATTCTG
TCTGAACACA TGAATATAAA GGAACGTGAA TTAAGAAATG AAATTAAAAT TTTAAAAGAA
AAACAATTAG TTAGTGTAGA GAATTACGGA ATGATTTTAA CAGATCTAGG AAATTCTGTT
TTACAAGATA GTAGGGAATT TGTTAAAAAT CTTTCGGGAA TAGTTGAAAT GGAAAAAAAC
TTGCAAAAAT TACTGGGCTT ACAGCAGGTT ATTATAGTAC CGGGAGATGC TAACAAAGAC
GAGACTGTCA AACAAGAGAT GGGAGCCGTA GCTGCCAAGA CTCTTTGGAA ACTATTATCA
TCCGGCGATG TAGTTTCCGT AGCTGGAGGC ACTACTCTAG CTGAACTGGC TAAAATGGCA
CCTCAAAAAT CTAAAAGTCA AGATATTACT ATTTTACCAG CTCGTGGCGG CTTGGGTGAA
CGAGTAGAAA TTCAGGCAAA CACAGTGGCG GCTAAACTTG CAGATAAATT TAATGGTAAT
TACCGCATGC TCCACGTTCC TGACGAAGTA GGAAAAGATT CCTTGGATAT GCTATTAAAG
GAACCAAAAA TCAAAGAAAT CGTAACTAAA ATCAAAAATG CAGACATACT TGTACATGGG
ATTGGAGTAG CTGAGGAAAT GGCCGAAAGA AGGGGATTAT CTCGTGAAAG GATTGAACGC
CTCCTAAATC AGGGGGTAGT TGGTGAAGCT TTTGGCTTTT ATCTTGACAG ATATGGCAGA
TTAGTCGAAA AAGTAAATAC TGTAGGAATA AGTTTATATG ATTTAGAAAA TATTGATAAT
GTAATGGCCG TTTCGGGAGG CAATAAAAAG GCAGTAGCGA TTTTAGCCAT GTTGGAAACT
GGACTCTGTG ATATTTTAGT TACAGACGAG GGTGCGGCTG AAAAAATTCA AGCTATAATG
AATACTTAG
 
Protein sequence
MEKEWDLLLK LTPELTEVAE KRYKILANIS YYQPVGRRIL SEHMNIKERE LRNEIKILKE 
KQLVSVENYG MILTDLGNSV LQDSREFVKN LSGIVEMEKN LQKLLGLQQV IIVPGDANKD
ETVKQEMGAV AAKTLWKLLS SGDVVSVAGG TTLAELAKMA PQKSKSQDIT ILPARGGLGE
RVEIQANTVA AKLADKFNGN YRMLHVPDEV GKDSLDMLLK EPKIKEIVTK IKNADILVHG
IGVAEEMAER RGLSRERIER LLNQGVVGEA FGFYLDRYGR LVEKVNTVGI SLYDLENIDN
VMAVSGGNKK AVAILAMLET GLCDILVTDE GAAEKIQAIM NT