Gene Nther_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1892 
Symbol 
ID6314620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1982992 
End bp1985784 
Gene Length2793 bp 
Protein Length930 aa 
Translation table11 
GC content34% 
IMG OID642644274 
ProductDNA polymerase I 
Protein accessionYP_001918051 
Protein GI188586506 
COG category[L] Replication, recombination and repair 
COG ID[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains 
TIGRFAM ID[TIGR00593] DNA polymerase I 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATAGTA ATGATTACCA AGCCAATGAT AAATTTGTTG TTATAGATGG AAACAGCTTA 
TTGAATAGAG CTTTTTATGC CCTGCCTTTA TTACAAACAA AGCAGGGTTT TTTCACAAAT
GCTATTTATG GTTTTACAAC TATGTTGTTA AAACTTGTTC AGGACGAATC ACCTAATTAC
CTGGCAGTAG TGTTTGATAC CAAGGCAAAA ACATTTAGAC ACCACAAGTT TCCCGAATAC
AAGGGTCACA GGGATAAAGC ACCTGATGAG ATGCGTCCAC AAATGCCCAT GTTGAAAGAA
CTGCTAGAGG CGATGAATAT TAATTACTTT GAAAAAGATG GTTATGAAGC AGATGACTTA
ATTGGAGCTT TCACTAAAAT TGCAAAACAA GAGGATAAAG AAACAATGGT GGTTACTGGT
GATAAGGATT TATTACAATT ACTCGATGAT AAAACAACTA TATTACTGAC TAAAAAAGGC
ATTACTCAAA TGGAAAGCTA TGATGGAGAA AAAGTTAAAG AGGAATTTGG TGTGAATGTC
GATAAACTAA TTGACCTAAA AGCGCTTACA GGTGATAAAT CAGATAATGT GCCGGGTGTC
CCGGGTGTAG GTAAAAAAAC CGCCTTAAAA TTACTTAATA ATTATGGTGA TTTAGAGAAA
CTATATAAAA GTTTAGATGG AGTAGGTGGA AAACTACAAT CTAAGTTAGC AGACAATAAA
GATAAAGCTT TTTTAAGTAA AGAATTAGTT ACTATTGACT GTGAAGAATC CCTGATTGAA
AACCTTGACT GGAACCAACT TTCTAAATTC GAAATTGCTT CTCCAAAAGC GCGTGAATTA
TTACAAGAAT GGGAAATGAA TAGTATTCTA GAAAGATTAC CTGCCAGTGA TGAAGAACAG
AAGAAAGACC AAAGCCCAGT AAATGAGGGG AAAACCTCTA GTTTTAACTG GGATAATTTT
TATTACATAT CCGAATTTCC CCATGAGAAT AGTGATAATC TTGAAAGTGA ATTAGAAAAA
TTCATTCAAG ACGGAAACCA TAAAATGGCT TTGTATAGGC ATTTACCCAA AAAATTAAGT
ACTGCTAAGC AAAAAGATAG TTATCCTGAA CCCGAAGGTG GTTTGGTTGT TTCTATTAAT
GATTTAATTT TTTATGTTCC TGAAAAGCTG CTTAGTCAGG TGTTAGCTGA AACTATTGCG
CCTAAACTGA TAAAAGGGAA TGACAAAGGA ACTGAAACAG AGGATGCACC AAAATTAAAA
ATAGCTTCCT ATAACATTAA GAGGATTTGG CATTTATTTA AAAACAATAC AGAACTTGAT
CTTTACGATT TAGATACAAA TAAATTTTTA TTTTATGATA CCGAACTAAT GGCTTATTTG
TTAGAACCTA CTGAAGCTCC ACATTCCATT GAAGACATGA TGAATAGGTA TTATGGACAA
TTTGACTTAA CGCCTTATGG TCAAGATTGG CAAGCTGTTT GCGAGAGAGG AGCAATCTTG
TTGGATTTGA TTTCTCCTTT AGAAGATATA TTACAGGAAA GAAATCAATG GCAATTATAC
AAGAATATCG AGTTACCATT AGCTTTTATA CTGGCAAGAA TGGAATTTAG AGGTATTAAA
GTAGATGCAA GGGTTCTGAC GGAAATGGAA GCAAATATTG ATCATAGGCT GTCTGAGATC
AGCACTAAAA TATTTGAAAT TGCAGGGGAA GAGTTTAATT TAAATTCTCC CAAACAGCTA
GGTTATATTT TATTTGAGAA ACTTCAACTA CCAGTTGTTA AGAAAACAAA GACTGGTTAT
TCTACCGATG CTAAAACATT AGAAACTTTG TCTCATGACT ATGAGATTTG CAAGCTGCTA
TTAGACTATC GCCAGTTACA TAAATTAAAG ACGACCTACT TGGTTGGACT AAAAGACTTG
ATTTCTAAAA CAACCGGTAA AATCCATACA ACTTATAATC AAACAATTAC TGCTACAGGA
AGGCTCAGTA GTACAGATCC TAACTTACAA AATATACCAA TAAAATTAGA AGAGGGTCGT
AAAATCAGAA AGGGATTTGT GATACAAAAT AGCGATCAGT TGTTCTTGGC TGCTGATTAT
TCCCAAATAG AGTTGAGAAT TCTAGCCCAT GTTTCAGAAG ATACTAATTT AATTCAGGCT
TTTCAAGAAC AGCAAGATAT TCATACACAG ACAGCAGCCC AGGTCTTTGA AGTAGAATCA
ACACAGGTTA CTAGGGAGAT GAGATCCCAT GCGAAAGCTG TCAATTTTGG AATTGTGTAC
GGGATAAGTG ATTATGGATT ATCAAGACAA CTGGGGATTT CGAGAAAACA AGCTAAAACT
TATATTGACA ACTATTTAAC AAGATTTTCG GGAGTCAAAG AGTATATGGA TCAAATAGTT
AACCAAGCTA AGATGAATGG TTATGTTGAA ACTTTGTACA ATCGAAGAAG AAACTTACCA
GATATAAGCC ACAGAAATTT CAATATTAGG TCCGCTGCTG AAAGAACAGC CATTAATACG
CCTATTCAAG GTACTGCTGC TGATATCATT AAAGACGCTA TGGTAAAAGT GGAAAAGGAA
TTGGAAAAAC AGGACTTACT TGATAAGGCC GCTTTGCTTT TACAGGTCCA CGACGAATTA
ATATTAGAAA TTAATAAAGA AGTTCTATCA GATGTTGCCA CTAAAGTTAA AGAAATAATG
GAAAATATCA TTGAATTAAA AGTCCCTCTA ACCGTTGATC TAAAAACTGG ACCAAACTGG
TACGATTTAA ATCCTTATCA ATCAGGAGAG TGA
 
Protein sequence
MNSNDYQAND KFVVIDGNSL LNRAFYALPL LQTKQGFFTN AIYGFTTMLL KLVQDESPNY 
LAVVFDTKAK TFRHHKFPEY KGHRDKAPDE MRPQMPMLKE LLEAMNINYF EKDGYEADDL
IGAFTKIAKQ EDKETMVVTG DKDLLQLLDD KTTILLTKKG ITQMESYDGE KVKEEFGVNV
DKLIDLKALT GDKSDNVPGV PGVGKKTALK LLNNYGDLEK LYKSLDGVGG KLQSKLADNK
DKAFLSKELV TIDCEESLIE NLDWNQLSKF EIASPKAREL LQEWEMNSIL ERLPASDEEQ
KKDQSPVNEG KTSSFNWDNF YYISEFPHEN SDNLESELEK FIQDGNHKMA LYRHLPKKLS
TAKQKDSYPE PEGGLVVSIN DLIFYVPEKL LSQVLAETIA PKLIKGNDKG TETEDAPKLK
IASYNIKRIW HLFKNNTELD LYDLDTNKFL FYDTELMAYL LEPTEAPHSI EDMMNRYYGQ
FDLTPYGQDW QAVCERGAIL LDLISPLEDI LQERNQWQLY KNIELPLAFI LARMEFRGIK
VDARVLTEME ANIDHRLSEI STKIFEIAGE EFNLNSPKQL GYILFEKLQL PVVKKTKTGY
STDAKTLETL SHDYEICKLL LDYRQLHKLK TTYLVGLKDL ISKTTGKIHT TYNQTITATG
RLSSTDPNLQ NIPIKLEEGR KIRKGFVIQN SDQLFLAADY SQIELRILAH VSEDTNLIQA
FQEQQDIHTQ TAAQVFEVES TQVTREMRSH AKAVNFGIVY GISDYGLSRQ LGISRKQAKT
YIDNYLTRFS GVKEYMDQIV NQAKMNGYVE TLYNRRRNLP DISHRNFNIR SAAERTAINT
PIQGTAADII KDAMVKVEKE LEKQDLLDKA ALLLQVHDEL ILEINKEVLS DVATKVKEIM
ENIIELKVPL TVDLKTGPNW YDLNPYQSGE