| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1552 |
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| Symbol | |
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| ID | 6316761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 1635245 |
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| End bp | 1635847 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642643926 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_001917717 |
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| Protein GI | 188586172 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0000315131 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAATGATA TAACAAATAA GTACAAAGCG GTTGTTCGTG ATAGACATGG TACGTTAGTA
ATAATATTTG TAAACCTATT GTTTTATATA GTTTTAAATA CAATTCCTAA TCTCGGTGAT
AAATTATTAC TGTATCCTGA AATAAATATG GTCATAGAAA GACCTTGGAC CTTAATCACT
GTATTTTTCT CCCACGAAAT TCATATTCAC ATTCTTGGAA ACATGGGGCT ATTTTTCTTT
TTTGGTTCTA AATTAGAAAA AGTTACTAAC TCAAAAGTTG TTATTTTAGT ATACTTAATT
ACTGGATTCA TAGGTAGTTT AGCAATTTTA CCTGTTGCTT ATCTTATAGA GTGGACTGAG
ACGGTAGTTG GTGCATCAGC AGCCGTTTTT GGGATAGTTT CAGCATTTGC AGTGTTGCGG
CCTAGCACTA TAATTTTACG CTCAAAGGCT AAATGGTGGG CATTAGCATT GTTTGTTTTT
AATGCAATTA TAGCAATTAT AAACCCTCAA ATTTCTGTTG GTGCTGGTGC TCATGCTGTT
GGAATTATCG TGGGGCTAAT TATTGGCTAT TGGCTTAAAA ACAAAAAAAC TAATCTGAAC
TAG
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| Protein sequence | MNDITNKYKA VVRDRHGTLV IIFVNLLFYI VLNTIPNLGD KLLLYPEINM VIERPWTLIT
VFFSHEIHIH ILGNMGLFFF FGSKLEKVTN SKVVILVYLI TGFIGSLAIL PVAYLIEWTE
TVVGASAAVF GIVSAFAVLR PSTIILRSKA KWWALALFVF NAIIAIINPQ ISVGAGAHAV
GIIVGLIIGY WLKNKKTNLN
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