Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1383 |
Symbol | |
ID | 6316636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1455451 |
End bp | 1456350 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642643763 |
Product | integrase family protein |
Protein accession | YP_001917554 |
Protein GI | 188586009 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00162011 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.640047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGAAACG AGTTGCTCGA CTTTTTGGAA TTTTTAAAAG GAGAAAAGAA TTTATCCCAT TATACCGTAG ACAATTACTA TAAAGACCTT ACTCAGGCAG AAAACTTTTT TAATGAACAA TTTGAGCTAT ATCAATGGGA TGAAGTGACA CATAAACATA TTAGACATTT TCTTGCCTAT TTAAAAGATA AAAACTACGA AAAAAGCACA ACGGCTAGAA AGTTGTCAGC TATTAGGTCA TTGTTCAAAT TTTTAACCAG GGAAGAAAAA ATAAGGTCTA ACACTAGCGC TTTATTAGCC ACACCAAAAA AAGAGCGCAA ACTACCGGAG TTTTTGTCAA TAGAAGAAGT TGAAATGTTG ATAAATGCCC CAGGTGATGA TCCTTTTGGA CTCCGTGATA AGGCAATCTT GGAGGTTTTT TATTGTTCAG GCATAAGGCT AGGAGAATTA TGGGGCCTTG ATTTACAAAA TTTAGATTTA CAAACTGGTT ACTTAAAAGT GACTGGAAAA GGCAATATTG AGCGGTTGGC ACCCTTGGGA AGCTTTGCCT TGGCAGCTAT AGAAGATTAT CTTTATAATG CCAGGCCTGA ATTACTTAAA AAGAATAAGT CAGTTGAAAA CTGTGATGCC TTATTCTTGA ATAAATTTGG AACAAGGATA TCTCAGCGCA GTATTAGGAG AAGGGTAAAA AAATACGTCC AACAAACTGC CTCAGAACAT AGAGTTTCTC CTCATAGTTT AAGACATAGT TTTGCAACCC ATTTACTAGA AGGTGGTGCC GATCTCAGGG CTGTTCAAGA ATTACTGGGA CATGTGAATA TATCTACGAC TCAAATTTAT ACCCATGTTA ATCAAGCCAG GATGACGGAG GTTTACAATA AATATCATCC CAGGGCTTAA
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Protein sequence | MRNELLDFLE FLKGEKNLSH YTVDNYYKDL TQAENFFNEQ FELYQWDEVT HKHIRHFLAY LKDKNYEKST TARKLSAIRS LFKFLTREEK IRSNTSALLA TPKKERKLPE FLSIEEVEML INAPGDDPFG LRDKAILEVF YCSGIRLGEL WGLDLQNLDL QTGYLKVTGK GNIERLAPLG SFALAAIEDY LYNARPELLK KNKSVENCDA LFLNKFGTRI SQRSIRRRVK KYVQQTASEH RVSPHSLRHS FATHLLEGGA DLRAVQELLG HVNISTTQIY THVNQARMTE VYNKYHPRA
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