Gene Nther_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1108 
Symbol 
ID6315326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1172156 
End bp1172587 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content37% 
IMG OID642643480 
ProductRubrerythrin 
Protein accessionYP_001917279 
Protein GI188585734 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.666656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.376082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAAC AAAAAAATTT AACTACTGAG AATGTGTTGG GAGAAGCCAA AGGTTCTGAT 
CTGGAAAGAC CTGTAAAACA AAATTTTCAA GGCGAAACAT CTGAAACGGG TTTGTATCTT
GCCATGGCTC GACAAGCTCA AAGAGAAGGC TATCCTGAAA TTGCAGAGAG TCTTAAAAGA
ATTGCCATGG AGGAAGCAGA ACATGCCGCA AGGTTTGCTG AATTAAATGG TATGATTAAT
GATAGTACTG AGGAAAATTT AAAAGAAATG CTTGAAGGAG AAATCTTTGC TAATCAAGAT
AAAAAGAAAG CGGCTGAAAA AGCAAAAGAC CAAGAATTAA CTGAAACTTA CACTTATTTT
ATTGAATCCT CCAAGGACGA AGCTAGGCAC GCAAAAATGC TTGAGGGTTT AGTTAACAAG
TATTTTGGAT AA
 
Protein sequence
MVEQKNLTTE NVLGEAKGSD LERPVKQNFQ GETSETGLYL AMARQAQREG YPEIAESLKR 
IAMEEAEHAA RFAELNGMIN DSTEENLKEM LEGEIFANQD KKKAAEKAKD QELTETYTYF
IESSKDEARH AKMLEGLVNK YFG