Gene Nther_0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0622 
Symbol 
ID6316793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp647464 
End bp648009 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content39% 
IMG OID642643005 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001916805 
Protein GI188585260 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACG ATACCAAGAG CCGAATTTTT GAAGCAGCGG CCAAAATCAT AAAAGAAAGA 
ACTGTTGATG ATATGACTTT AGAAGAAGTA GCTAAAGAAG CGGGAATCAG CAAAGGCGGG
TTGTTATACC ATTTTCCCAG CAAAGAAGAT TTAATTGAGG GTTTAGTGGC TTATTATGAG
CAATTATTTA CTGGAGAGAT AGAACAAGAG ATGGGAAAAA TGCCTGAAGG AGAGAAACGT
CCATTAACAG CTTATATAAA TGCTGCTTTT AATTTTCAAT CAAAAGCTTA TGAAATTAGT
CAGGGAGTAT TAGCTGCCAG CTTATTGAGC CCGGGTTTAC TCGCCCCTGT GCAGAAGCGG
CTGTCTGATT TTACCTCGCA GTATGATCAA CATTTAAAGG ATGAGGATAT GGCTAATATT
GTAAGATTAG CAGCAGATGG TCTATGGTTA GAGGATATCT TGGAGCTCAA TACTGTTCCA
AAAGCCGAAA GAGATCGTAT TAAAGAAAAA CTTATTCAAT TAGCTAAGGA GGTGGAGGAA
CGATGA
 
Protein sequence
MSDDTKSRIF EAAAKIIKER TVDDMTLEEV AKEAGISKGG LLYHFPSKED LIEGLVAYYE 
QLFTGEIEQE MGKMPEGEKR PLTAYINAAF NFQSKAYEIS QGVLAASLLS PGLLAPVQKR
LSDFTSQYDQ HLKDEDMANI VRLAADGLWL EDILELNTVP KAERDRIKEK LIQLAKEVEE
R