Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0622 |
Symbol | |
ID | 6316793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 647464 |
End bp | 648009 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642643005 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001916805 |
Protein GI | 188585260 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACG ATACCAAGAG CCGAATTTTT GAAGCAGCGG CCAAAATCAT AAAAGAAAGA ACTGTTGATG ATATGACTTT AGAAGAAGTA GCTAAAGAAG CGGGAATCAG CAAAGGCGGG TTGTTATACC ATTTTCCCAG CAAAGAAGAT TTAATTGAGG GTTTAGTGGC TTATTATGAG CAATTATTTA CTGGAGAGAT AGAACAAGAG ATGGGAAAAA TGCCTGAAGG AGAGAAACGT CCATTAACAG CTTATATAAA TGCTGCTTTT AATTTTCAAT CAAAAGCTTA TGAAATTAGT CAGGGAGTAT TAGCTGCCAG CTTATTGAGC CCGGGTTTAC TCGCCCCTGT GCAGAAGCGG CTGTCTGATT TTACCTCGCA GTATGATCAA CATTTAAAGG ATGAGGATAT GGCTAATATT GTAAGATTAG CAGCAGATGG TCTATGGTTA GAGGATATCT TGGAGCTCAA TACTGTTCCA AAAGCCGAAA GAGATCGTAT TAAAGAAAAA CTTATTCAAT TAGCTAAGGA GGTGGAGGAA CGATGA
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Protein sequence | MSDDTKSRIF EAAAKIIKER TVDDMTLEEV AKEAGISKGG LLYHFPSKED LIEGLVAYYE QLFTGEIEQE MGKMPEGEKR PLTAYINAAF NFQSKAYEIS QGVLAASLLS PGLLAPVQKR LSDFTSQYDQ HLKDEDMANI VRLAADGLWL EDILELNTVP KAERDRIKEK LIQLAKEVEE R
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