| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0247 |
|---|
| Symbol | |
|---|
| ID | 6316010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 258938 |
|---|
| End bp | 260626 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642642630 |
|---|
| Product | AAA ATPase |
|---|
| Protein accession | YP_001916434 |
|---|
| Protein GI | 188584889 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.472515 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAG AAAAAAATAG GACAGTTGAT GTTTTTGAGT ATAAAACAGC ACATTATACG
CCTCAGAAGA TAAAAGATTA TGCGGGGAAC CCACTAATTG AAGCACTACC ACCTATTCTT
GAAACCGATG AAGAAGTTAT AGATATGTTA TATAGTTTAC CTTCAATTGA TGATCATGAA
AGAAATTTGT CGCCGTTATT AAAAACTCAT GTAATAAAAA GAGTTAAGCG TTTTATTCAA
CCTCTACCTA TTCACATTAA CCTAGAGTCG AAAATTTCAG TATTAATAAG ACAGTCTTAC
TTATCAAGAA ATCCCTTAAC ACCTGAATAC AAGAAGCGCA TTAAATTGTT ACATACTCTA
AAAAAAGAGG AAGAAATAAC TCCCGATGAA GTTGAAAGCC ATTATCGTTC TTATAGTTCT
ACAGCTGAAT GCCTTTTTAT TAATGGAGTA TCTGGCATGG GTAAAACTAC TGCTGTTAAC
AGAATATTGG AACAGTACCC ACAGATAATC AAGCACACTG AATATAAAGG GCAGAAGATA
ACAACTACAC AAATAGTTTG GCTTAAAATT GATAGTCCTT ATGATGGTAG CTTTATGACT
TTATGTAGAA ATATATTTCA GGAGATCGAT AAGTTATTAG GAACCAGGTG GATGGAAAAG
TATGGATACT TTACAAGATC TACTTCAACG ATGGTCATGT ACCTAACTAC TTTGTTAGCC
AACTATAATG TAGGGTTATT AGTGATTGAT GAGATTCAAA ATATTTATAG AGCAAAAAAG
AATGATCCTA TGGAGATGTT AGACTATTTT GTTACGTTAA CTAATGTGAT TTCTGTTCCA
ATACTGATTA TCGGTACAAA TCGTGCGAGA AACTTGTTTC AGGATAATTT CCGACTTGCT
AGAAGAGTAC AATCTGACGG GTATATAGAA ATTGCAAATC TCAAAAAAGA TAGTCCCGAC
TGGGAAATTT TTATAGAATC TTTATGGGAA TTTAATGTGT TAGAAAACCA GGGTCCTCTT
ACGGATGAAT TAAATGATAC TTTTTATGAA TTATGTCAGG GTGTAATAGC TGTTGCAGTG
ATGTTACTAA TGTTTTCCCA AAACAGGGCA ATAAGTGAGG GCAAAAAGTC ACTAACAACT
GATATTATTA AGAAGACTTA TAAAGAAGAT TTGCAATTAA TAAGACCAAT GATTGAAGCG
TTACGGTCTG GAGACCCATT TGAGATAGCG AAATTTGATG ATATTACAAT AGATGAGGAG
AAAATTCTAA GCAACTATCA TAAAGATATT GCTATGACTG AAAGTGTACA AGCGGCTATA
CGTCAGAAAA AAGATAAGAT AGAATCTACC CGGGAAAGTA TAAATGAGAA ACTGTTTTTT
GAGTTCAGTG CTTCAGGTTT TTTTAATGAT ATTAAACAAG AAGTGATGAA AAAAATAATT
AACAAGGTTG TAGAAAGCTC AGATGTCGCT ACTGAATATG AGGATTTAAA AGAGCTAGTA
ATGGAGCTTT TACAGAAAGA AAAAAGAAAG GTTAAGAAAA AACCTCGAAG AAAGAATATC
AATCCTGATA ATGTCACTTT GATCTCATTA TATGATAGTG CAATAGATAA AAGCCAACAT
CCCTATGATG CTTTTAAGAG GGAAAAGTTA ATAAAAGATC CACTAGATGA ATTTCTGAGG
GTGGATTAA
|
|---|
| Protein sequence | MSVEKNRTVD VFEYKTAHYT PQKIKDYAGN PLIEALPPIL ETDEEVIDML YSLPSIDDHE
RNLSPLLKTH VIKRVKRFIQ PLPIHINLES KISVLIRQSY LSRNPLTPEY KKRIKLLHTL
KKEEEITPDE VESHYRSYSS TAECLFINGV SGMGKTTAVN RILEQYPQII KHTEYKGQKI
TTTQIVWLKI DSPYDGSFMT LCRNIFQEID KLLGTRWMEK YGYFTRSTST MVMYLTTLLA
NYNVGLLVID EIQNIYRAKK NDPMEMLDYF VTLTNVISVP ILIIGTNRAR NLFQDNFRLA
RRVQSDGYIE IANLKKDSPD WEIFIESLWE FNVLENQGPL TDELNDTFYE LCQGVIAVAV
MLLMFSQNRA ISEGKKSLTT DIIKKTYKED LQLIRPMIEA LRSGDPFEIA KFDDITIDEE
KILSNYHKDI AMTESVQAAI RQKKDKIEST RESINEKLFF EFSASGFFND IKQEVMKKII
NKVVESSDVA TEYEDLKELV MELLQKEKRK VKKKPRRKNI NPDNVTLISL YDSAIDKSQH
PYDAFKREKL IKDPLDEFLR VD
|
|---|
| |