| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04856 |
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| Symbol | |
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| ID | 6305038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1524585 |
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| End bp | 1525364 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642638811 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001912688 |
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| Protein GI | 188575759 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.124342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCATG CTGGCAACAG GACAGGGAGC GCGCCGATGA ATGCCGACAC GCTGGATCTG
ATGTTGCAAC GCGACCTGCC CAGCGCCGCA GCTGGCTGCC AGCAGGTTGA TGGGCGCAGC
GCACTTGCAT ACCAGAACAC GGTGCCCCCG ATGTCGCTGG CGATCACCCG CGACATCGCA
GCCAGCGAAG ACATCGCCCA GGAGGCCTTC CTGCGTGCCT GGCAGCGGCT GGCGCAGCTG
CATCAGCCGG CCAGCTGCCT GCCCTGGCTT CGGCAGACCA CCCGCAACCT TGCGCGCGAC
TGGCTGCGCG CCAACCGCCA TCGTGCGCGC AGCGGTGAGG CGGCCGAGCT TGCCATCGCG
ATGGCAGCTG ATCCGGCGCC CTCGCGCGCC GACCAATTGC TGCAGGTGGA AGAAGAAATC
GCCGCACTCG ACATCATGTC TGCATTGCCG GAAGGAGGCA GGCGCGCGGG CATCGGTTCT
GCCGCTGTGC GCAGGCATGG CGGTGCTCAA CTCTCAATCC CTGCGCATAC GGCCACGCAT
CATGCGCCCC ATGCTCAAGC GCGATGCGCG CAGACGCGGC GCCACCCGGG CACCGCTGTT
GTACCGCTGC ATGTTCAGTC CGGGCGCGAT GATGGTGAGC ACGGCGGCCG TCATTCTGCC
GATCGCGCAG CACGACATGC GGTTGGGGAT GCTTTGAGGG CCGGCGGAGG TCACCGCTGT
AGCGGCAGTT GCAAACTCTT CCCGGACGAT GACATCCGGG TGCAGATCCA CCTGCGCTAG
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| Protein sequence | MRHAGNRTGS APMNADTLDL MLQRDLPSAA AGCQQVDGRS ALAYQNTVPP MSLAITRDIA
ASEDIAQEAF LRAWQRLAQL HQPASCLPWL RQTTRNLARD WLRANRHRAR SGEAAELAIA
MAADPAPSRA DQLLQVEEEI AALDIMSALP EGGRRAGIGS AAVRRHGGAQ LSIPAHTATH
HAPHAQARCA QTRRHPGTAV VPLHVQSGRD DGEHGGRHSA DRAARHAVGD ALRAGGGHRC
SGSCKLFPDD DIRVQIHLR
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