| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04743 |
|---|
| Symbol | |
|---|
| ID | 6304895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1383876 |
|---|
| End bp | 1384784 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642638668 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001912545 |
|---|
| Protein GI | 188575616 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2961] Protein involved in catabolism of external DNA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTATC GTCACGCCTT CCATGCCGGC AACCACGCCG ACGTGCTCAA GCACATCGCC
CTGCTTGCCC TGATCGACAC CCTCAAGCGC AAGGACACCC CGTTCTTCGT GCTCGATACC
CACGCCGGGC GCGGGCGCTA CCAACTCGGT GGCGAAGAGA GCCGCAAGAC CAACGAGGCC
GATGCCGGGG TGATGCGGCT GATGGCCGAA GCGAGCTTGC CCGAAGTGGT CGAGCGTTAC
CTGCGCGCGG TGCAGGCCGA CAACCAGGCC GTCGCCCGCC CGGCCACGCC TGGCCAGAAA
CCCGCCCGGA CCACAGCCGG CATCCAGCTC AATTACTACC CCGGCTCGCC GTTGCTGACC
GCGCAGGCGC TGCGCGAGCA CGACCGCATG GCATTGTGCG AACTGCAGAC CGACGAAGCC
GAGGCGCTCA AGGGCTTGTT CGCCAAGGAC AGCCGGGTTC GGGTGCATGC CGGCGACGGC
TATGCGGCAA TCCGCGCCTT CCTGCCGCCG CGGGCGGGCG AAACCAGGAT CGGCCGCGGG
CTGGTACTGA TCGACCCGCC GTACGAATCG CAGGACGCCG AGTACCAGCA GATCATCCAC
AGCGTGCGCG AGGCGTTGGC GCGCTGGCCG CAGGCGATCT GCATGGTGTG GTACCCGATC
AAGCTGCGCC GTAGCCTGCA GCCCTTCATG CGCAAGGCCG CCACGCTGCC CGCCAAGTCG
GTCCTGGTCG CCGAGCTGCA GGTGCGCCCG GACGACTCGC CACTGCGCCT GACCGGTAGC
GGGCTGCTGA TCGTCAATGC GCCCTGGCAA TTCGATCAAG TGCTGGCGCC CGCGTTGCCG
GCCCTCAAGA AGCATCTCGG CGAGCACGGC GCCTCGACCC GGCTGGAGTG GCTGCGCCAG
GACGGCTGA
|
|---|
| Protein sequence | MNYRHAFHAG NHADVLKHIA LLALIDTLKR KDTPFFVLDT HAGRGRYQLG GEESRKTNEA
DAGVMRLMAE ASLPEVVERY LRAVQADNQA VARPATPGQK PARTTAGIQL NYYPGSPLLT
AQALREHDRM ALCELQTDEA EALKGLFAKD SRVRVHAGDG YAAIRAFLPP RAGETRIGRG
LVLIDPPYES QDAEYQQIIH SVREALARWP QAICMVWYPI KLRRSLQPFM RKAATLPAKS
VLVAELQVRP DDSPLRLTGS GLLIVNAPWQ FDQVLAPALP ALKKHLGEHG ASTRLEWLRQ
DG
|
|---|
| |