Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04742 |
Symbol | creC |
ID | 6304896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1385220 |
End bp | 1385939 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642638669 |
Product | sensor protein CreC |
Protein accession | YP_001912546 |
Protein GI | 188575617 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTGCACT TGGAACTTGA GTCGGCCCTG GAAGGCAAGG CCTATGTTGT GCAATACCTG CAGTCGTTGA CGCACGAGAT GAAACGTCCG CTTGCGGTGA TTCGCAGCGC ATCCGAGTTG TTGACCGAGC CGGTGCCGGA AACCGATCGC CAGCACTTTG TGGCCAGTAT CCGCGCGCAG GAACAGCGGC TCACCGAAAC CATCGACAAG CTGCTGGCGC TGGCCGAAGT GGAGCAGCAT GGCTGGCTGC AGACGCGCGA ACGCATCGGT CTCAGGAGGC TGCCACAGGC TGCTGCGGAG GCGATATCGC TGCGTGCTGC GGCGACTGGC GTGATGGTGG ACGTCGATGC AAGCGCTGCG ACCTCAGGCG ATCACCACGT ACTCGGTGAT GGCTTCCTGC TGCGTCAGGC ATTGATCAAT CTGCTGGAAA ACGCCATCGC GTTTTCGCCG CAGGACAGCT GCGTGCGTCT GCATCCGCAG CTGCGCGATG AACATTGGGA GTTGGCGGAC GAAGACCGTG GCAGCGGCGT GCCGGATTAC GCGATCGAGC GCGTCTTCGA GCGTTTCTAT TCGCTGGCAC TCCCGCAGAC CGGCCAACGC GGCTCGGGCC TTGGTCTGCC GTTCGTGGGT GAGGTGGCGC GCCTGCATGG TGGGGACGTC ACACCAGGCA ATCGTGACGG CGGTGGTGCG ATGGCGATGT TGCCCCTGCC AATTGGCTGA
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Protein sequence | MLHLELESAL EGKAYVVQYL QSLTHEMKRP LAVIRSASEL LTEPVPETDR QHFVASIRAQ EQRLTETIDK LLALAEVEQH GWLQTRERIG LRRLPQAAAE AISLRAAATG VMVDVDASAA TSGDHHVLGD GFLLRQALIN LLENAIAFSP QDSCVRLHPQ LRDEHWELAD EDRGSGVPDY AIERVFERFY SLALPQTGQR GSGLGLPFVG EVARLHGGDV TPGNRDGGGA MAMLPLPIG
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