| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04718 |
|---|
| Symbol | |
|---|
| ID | 6304854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1332150 |
|---|
| End bp | 1332998 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642638627 |
|---|
| Product | lipoprotein, putative |
|---|
| Protein accession | YP_001912504 |
|---|
| Protein GI | 188575575 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0504656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGC GTCGCCGCAG TGACATGTCT GCTGGCATCT GGTGCTCGGC GCTACTGGTC
ATCGGTGGCT GCCAGGCCAA GCCTGCGAAC GAGGCCGCCA AACCGACAGC CGAAGTGCAG
ACGCGTGTGG AAGCATTGAA GCAGAAGACG CTCAAGGATT TGGTGCAAGT GAAAGGCGGC
ACCTTCCTGA TGGGCGATTT CGGGCCGGTG CACAACCCGG ACAAGCTGCC CTATAGCGGC
GAGCGCAACG ACGACGTGCT GCGCAACGTA ACCCTGGACG GCTACGCCAT CACCGCGCAC
AAGATCACCT ATGCGGACTA TGACGTGTAT ACCGATGCGA CGGGGAAGCC GAAGGTGGCA
CAGGATAAAG TCGATCTGGA GTATCGAAAC CTTCCCGATA TCCCAGCTGG CGTGAACTGG
AATGACGCAC AAGCCTATTG CCGCTGGGTC GGCCAACAGA TCGGCAAGAA GATGGATCTG
CCGACAGAGG CGCAATGGGA ATACGCCGCG CGCAGCGGCG GCAAAATGGT GGTACGTCCG
ACCGATAATG GGGAAATCGA GGATGGACGC AATGTTGCTT CATTTGAGCA GGCAGGGAGC
TTCAGAAGCG AGCACAACTA CATCTACGGC CCAACTCCCA TTGGCAAATA CCCACCGAAT
CCATTAGGTC TTTACGACAT GATAGACCAC GGCTTTGAAT GGGCGCGCGA CTGGTATGCC
GAGTCCTACG ACCCCAAAGA CCTGAAGAAT CCCCAGGGCC CTAAGACCGG CAGAGAAAAA
GTACAACGCG CGCATTCAAA TTCAGGTGGG GGCGGCTTCA ACTCTGGATC GCAACACCAA
CGGTTGTGA
|
|---|
| Protein sequence | MKQRRRSDMS AGIWCSALLV IGGCQAKPAN EAAKPTAEVQ TRVEALKQKT LKDLVQVKGG
TFLMGDFGPV HNPDKLPYSG ERNDDVLRNV TLDGYAITAH KITYADYDVY TDATGKPKVA
QDKVDLEYRN LPDIPAGVNW NDAQAYCRWV GQQIGKKMDL PTEAQWEYAA RSGGKMVVRP
TDNGEIEDGR NVASFEQAGS FRSEHNYIYG PTPIGKYPPN PLGLYDMIDH GFEWARDWYA
ESYDPKDLKN PQGPKTGREK VQRAHSNSGG GGFNSGSQHQ RL
|
|---|
| |