| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04688 |
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| Symbol | |
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| ID | 6304605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1098906 |
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| End bp | 1101662 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642638380 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001912262 |
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| Protein GI | 188575333 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCTC GTTGTTCGCT GTTGGCGCAG GCGCTGTGTT TATCGTTGTG TGCGCTGTGC
GGGCATGCCG CAGCCCAGGA GACGCAGGCC ACCACACCTG CCAAGGGTGA GATGGCCACG
CTGGACAAGG TCACTGTCGC CGCAACGCGC TATAACGCGA CCGACATGCA GATGGCTGCG
ACCAACACCG TCAATGTGTT GTCGGCCGAC GATCTCAAAA CCACCGCCGT GCACAACGTC
GCCGAAGCGC TGGGCCTGAT GCCGGGCGTC AACGTGATCA ATACCGGGCA GTCGTATTTC
GGCGGCATCG ACGGCGCTGC GCGCGGCGAA GGCATGTTCT CATCGGTACG CGGTCTCAAT
GCCGAATACA ACGTCAACCT GATCAACGGC ATCAATGTCG CGCAAGGCAT GCCGTACAGC
CGCGGCGTGC AATTGAGCCT GCTGCCGCCC TCTGGCTTGC AGACCATCGC CTTGAGCAAA
ACCTCCACCG CCGATATGGA CGGCGATGCG ATCGGCGGCA CCATCGATTA CCGCACGCCC
AGCGCATTCG ATTCGACCGA TCGCCAGGGC GGCAGCGTGA CGCTGAGCGG ACGCCTGGAA
AGCCGGGCAC GCGACTACGG CGATTCCGGT CTGGGCAGTG GCGCAGCCGG CGATTGGCAT
GCGCGTTTCG GCGATGCGGG GCAGTTCGGC GTTGCGGTCA GTGCGTATTA CGATGAGCGC
CATTTCGTCA ACAGCGAAGT GGCCGCTGCC TCGGCCGCAC GCAACGATGG CGCGTGGAAA
TTCGGTCGTG CCGATGCCAG CGGCAAGCTG GCGGCCGGTG CCGATCCGCA GGACGTGTTA
CAGAGCACCG GCATGAACAT CGGTTACTCG CAAGGCGACA CGCGCCGATA CGGCGGCAAT
GCGGCGTTCG ATTGGCGCGT GGACCCCAGC CTGCATCTGT ATGCACGCAT GACCTACGCC
TTCGCCAAGA CCGAGCAGAA CACCGGCTAC GCGCAGTTCG TGCCGGCCAA TGTCAGCTTC
ACCCAGATCG GCACCAGCGG CGTGTATCAG CCGCAGATCA ATCGCGTTGC AGTGCGTTAC
TGGTACGAAA CCAACCCCGA AAAGGCAGAC CTGGCCACCG TGCAGTTTGG TGCGGACAAG
CAGCTCGGGC ATTGGACATT TTCACCGAAC ATCTTTTACG GCACGGGCAA TAACGATCGC
CCGGACCATG TGGAAATTTC CGCGCGCAAC GATCAATACA GTTCGACCAA CTTCGCCTAT
GGCGCCAACC GCTTCATCAG CTACGACGGC AACGGCTTTC CGACGCCGTT GCTCACCCCG
GCCATGCAGG CGCAGGCCTC GGATGTGGAA AGCCTGTATG CGCGGCGCAC CGGGCAGATT
TCCAAGCAAT ACAGCGGCCA GGACAAAGGC GGCGGCAAGT TCGATGTGGC ATACGATTTC
GATGCCGGGT TGCTTAGCCG TATTGCGTTC GGCGTGAAGT ATGTCGACAG CTCGCGCAAC
TTCACTGATC GCGATTGGAC CAATGCCAAG TACACCGACC GCACCTTGTT GCGCGACACC
GGCCTGATCG CGCAGCGCTA CGATTCGGTC TATCCGGGCC AATATGCGTT TCCCACCGTG
CGCCTGAGCA ATGCGGCGCT CAACGACCTG ATCGCACGTA CGCTCACGCC TGCCAGTTTC
GACAGCTGCG GCAAGCTGGC GATCAATAAC CTCAACTGCA ACACCATGCG CGCCACCGAA
GCGGTGAGCG CGGCCTACGC AATGGCCACC TTGCGCAGCG GTAACTGGGA AATCCTGCCA
GGCGTGCGCT TCGAACATAC CGCCATCACC AACACATTCT GGGCGCAGCC GGCCGCCATC
AATGGTGCCG AGCAGGTCGG TGCGTTCGCC AACAATCACA GCCGCTACAA CGTCGCTTTG
CCGAGCGTGT TCGTCAATTA CCGGCCCGAT GGCGATGGCG CCGTGTATCG CGGTTCGGTG
TGGACCAGTT ACACACGCCC GGCATTCGTG CAGTTGGGCG GCGGCCGCTC CACCGATATT
TCCAGCGACG GCCAGACCAC CATCACCGAA GGCAACCCGG ATCTCAAACC GATCAAGTCG
CTCAATGTGG ATGTGTCGGG CGAATGGCAG AACGACAGCG GCGGCCACGC CATGCTGGCC
GGTTATTACA AGCGCCTCAC CGATTACATC TACGAGAGCG GCTCGAATGC TGCCAATCCC
GGCGAAAGCG TTACCGCCAG CACCCGTTTC GTGCGTCCGC AGAACGGCGG CGACGGCCGC
GTGCTGGGCA TGGAAGCGGC TGTGCGGCAG ACCTTTCAGG GCCTGCCCGC ACCGCTGGAT
GGCTTCGGCA TAGGCGCCAA TGTCACCCGT CAGACCACGC GCGTGGATCT GGGGACGGAA
GGCTTCGCGC ACGAACGTAT CCAGAACGCG CCGAACCTGC TCGCCAATGC GGAGCTGTTC
TACGAAAAGG GGCCGTGGTC GGTCAACCTG AGCTATCACT ACTCCGGCGA ATACGTGTCG
GTGTATGACT ATCTCAACCA GGGCGCGCAG TGGGACAACC TGTGGATCAA GCCGATCACC
CGCGTCGACC TGCATCTGGG CTACGCCCCG ACCGATCACC TGCGCGTGGA TCTGTCGGTG
GCCAACCTCA CCAACCAGCA CAGCTACTGG GCGCACGTGG GCCATAATAC CGACGCAATT
TCCGACATCG TCGATTCCGG CATGACCAGT CTGGTGACCG CAAAATATGT GTTCTGA
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| Protein sequence | MIARCSLLAQ ALCLSLCALC GHAAAQETQA TTPAKGEMAT LDKVTVAATR YNATDMQMAA
TNTVNVLSAD DLKTTAVHNV AEALGLMPGV NVINTGQSYF GGIDGAARGE GMFSSVRGLN
AEYNVNLING INVAQGMPYS RGVQLSLLPP SGLQTIALSK TSTADMDGDA IGGTIDYRTP
SAFDSTDRQG GSVTLSGRLE SRARDYGDSG LGSGAAGDWH ARFGDAGQFG VAVSAYYDER
HFVNSEVAAA SAARNDGAWK FGRADASGKL AAGADPQDVL QSTGMNIGYS QGDTRRYGGN
AAFDWRVDPS LHLYARMTYA FAKTEQNTGY AQFVPANVSF TQIGTSGVYQ PQINRVAVRY
WYETNPEKAD LATVQFGADK QLGHWTFSPN IFYGTGNNDR PDHVEISARN DQYSSTNFAY
GANRFISYDG NGFPTPLLTP AMQAQASDVE SLYARRTGQI SKQYSGQDKG GGKFDVAYDF
DAGLLSRIAF GVKYVDSSRN FTDRDWTNAK YTDRTLLRDT GLIAQRYDSV YPGQYAFPTV
RLSNAALNDL IARTLTPASF DSCGKLAINN LNCNTMRATE AVSAAYAMAT LRSGNWEILP
GVRFEHTAIT NTFWAQPAAI NGAEQVGAFA NNHSRYNVAL PSVFVNYRPD GDGAVYRGSV
WTSYTRPAFV QLGGGRSTDI SSDGQTTITE GNPDLKPIKS LNVDVSGEWQ NDSGGHAMLA
GYYKRLTDYI YESGSNAANP GESVTASTRF VRPQNGGDGR VLGMEAAVRQ TFQGLPAPLD
GFGIGANVTR QTTRVDLGTE GFAHERIQNA PNLLANAELF YEKGPWSVNL SYHYSGEYVS
VYDYLNQGAQ WDNLWIKPIT RVDLHLGYAP TDHLRVDLSV ANLTNQHSYW AHVGHNTDAI
SDIVDSGMTS LVTAKYVF
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