| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04632 |
|---|
| Symbol | vanR |
|---|
| ID | 6304657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1154308 |
|---|
| End bp | 1154517 |
|---|
| Gene Length | 210 bp |
|---|
| Protein Length | 69 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642638432 |
|---|
| Product | VanR |
|---|
| Protein accession | YP_001912314 |
|---|
| Protein GI | 188575385 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCCGAGC GCCTGGGCAT TTCGCGCACC CCGATCCGTC AGGCCCTGCC GGCGTTATGC
CAGGAAGGTC TGCTGGTGCA GGCCGGCAAC CGTGGTTATG CGGTGCGACG TTTCAGCCAG
CGTGAGAGCC TGGATGCACT GACGGTGCGC GCATTGATGG AAGGCATGGG CGCGCGCACG
GTCGCCGAAG AAGGCGCCTC TGAGGAATGA
|
|---|
| Protein sequence | MAERLGISRT PIRQALPALC QEGLLVQAGN RGYAVRRFSQ RESLDALTVR ALMEGMGART
VAEEGASEE
|
|---|
| |