Gene PXO_04524 details

Gene Information

• Locus tag: PXO_04524
• Symbol: tuf
• ID: 6304764
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1253876
• End bp: 1255030
• Gene Length: 1155 bp
• Protein Length: 384 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642638538
• Product: elongation factor Tu
• Protein accession: YP_001912415
• Protein GI: 188575486
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0050] GTPases - translation elongation factors
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.00165696
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACGTCG GCACCATCGG TCACGTTGAC CATGGCAAGA CCACGTTGAC CGCTGCGCTG 
ACCAAGATCG GTGCAGAGCG TTTCGGTGGT GAGTTCAAGG CGTACGACGC GATCGACGCG 
GCGCCGGAAG AGAAGGCGCG CGGCATCACG ATTTCGACCG CGCACGTCGA ATACGAATCC 
CCGTCGCGCC ACTACGCACA CGTGGATTGC CCCGGTCACG CCGACTATGT CAAGAACATG 
ATCACCGGTG CAGCGCAGAT GGACGGCGCG ATTCTGGTGT GTTCGGCCGC GGACGGCCCA 
ATGCCGCAGA CCCGTGAGCA CATCCTGCTC TCGCGTCAGG TCGGTGTGCC GCACATCGTC 
GTGTTCCTGA ACAAGGCCGA CATGGTCGAC GACGCCGAAT TGCTCGAGCT AGTCGAAATG 
GAAGTGCGCG AGTTGCTCAG CAAGTACGAC TTCCCGGGCG ACGACACCCC AATCATCCAC 
GGTTCGGCGC GTCTGGCGCT GGATGGCGAT CAGAGCGAGA TCGGCGTGCC GGCGATCCTG 
AAGCTGGTCG ACGCGCTCGA CACCTTCATC CCGGAGCCGA CCCGCGACGT CGATCGTCCG 
TTCCTGATGC CGGTGGAAGA CGTATTCTCG ATCTCGGGCC GCGGCACCGT GGTGACTGGT 
CGTATCGAGC GCGGCATCAT CAAGGTGGGC GACGAAATCG AAATCGTCGG TATCCGTGCG 
ACGCAGAAGA CCACGGTGAC GGGCGTGGAA ATGTTCCGCA AGCTGCTTGA CCAGGGTCAG 
GCGGGCGACA ACGCGGGTCT GCTGCTGCGC GGCACCAAGC GCGACGACGT CGAGCGTGGC 
CAGGTGCTGT GCAAGCCGGG TTCGATCAAG CCGCACACCG AGTTCGAAGC CGAAGTCTAC 
GTGCTGTCGA AGGATGAAGG TGGCCGTCAT ACCCCGTTCT TCAAGGGCTA CCGTCCGCAG 
TTGTACTTTC GCACCACCGA CATCACGGGC GCGATTGATT TGCCTGAAGG GGTGGAGATG 
GTGATGCCTG GCGACAACGT CAAGATGACG GTGACGTTGA TCAACCCGGT GGCGATGGAC 
GAAGGCCTGC GTTTCGCGAT CCGCGAAGGC GGCCGTACCG TCGGTGCCGG CGTGGTGTCC 
AAGATCATCA AGTAA 

 

Protein sequence

MNVGTIGHVD HGKTTLTAAL TKIGAERFGG EFKAYDAIDA APEEKARGIT ISTAHVEYES 
PSRHYAHVDC PGHADYVKNM ITGAAQMDGA ILVCSAADGP MPQTREHILL SRQVGVPHIV 
VFLNKADMVD DAELLELVEM EVRELLSKYD FPGDDTPIIH GSARLALDGD QSEIGVPAIL 
KLVDALDTFI PEPTRDVDRP FLMPVEDVFS ISGRGTVVTG RIERGIIKVG DEIEIVGIRA 
TQKTTVTGVE MFRKLLDQGQ AGDNAGLLLR GTKRDDVERG QVLCKPGSIK PHTEFEAEVY 
VLSKDEGGRH TPFFKGYRPQ LYFRTTDITG AIDLPEGVEM VMPGDNVKMT VTLINPVAMD 
EGLRFAIREG GRTVGAGVVS KIIK