| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04469 |
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| Symbol | raxR |
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| ID | 6304818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1296057 |
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| End bp | 1296773 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642638591 |
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| Product | two-component system regulatory protein (response regulator) required for AvrXa21 activity R (raxR) |
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| Protein accession | YP_001912468 |
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| Protein GI | 188575539 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCTGC TGGTCATTGA AGACAACCGC AATATGGTTG CCAACCTGTT CGACTACTTC
GAAGCGCGCG GGTATACCCT GGACGCTGCG CCCGACGGCA TCACCGGCCT GCACCTGGCC
ACCACCCACC ACTACGACGC CCTGATCCTT GACTGGATGA TGCCGCGCAT GGATGGGCCG
GAAGTGCTGC GCCGGCTGCG CGAACAGCAC CAATCCGAGC TGCCGGTGAT CATGCTCACC
GCGCGCGACG AACTGCCGGA CAAGATCGCC GGCTTCCGCG CCGGCGCCGA CGACTACCTG
ACCAAACCCT TTGCACTGCC CGAGCTGGAA GTGCGTATCG AAGCCTTGCT GGCCCGCGCG
CATGGCCGTC GTCGCGGCAA GCTGCTGCAA GTGGCCGACC TGCGGCTGGA CCTGGCCACC
CTGGAGGCCA CCCGCGCCGG CCAGGTGCTG CATCTGTATC CGGCGTGCCG CAAGTTGCTC
GAAGTGCTGA TGCAGGCCAG CCCGGCGGCG GTGACGCGGC AACGCCTGGA GCAGTCGCTG
TGGGACGACG ACCCGCCCGA CGGCGACATG CTGCGCTCGC ATATCTACGA GCTACGCCGC
AGCGTGGACG GCCCGTTCGC AGAAAAACTG ATCCACACCT TGCCGCGACT CGGCTACCGG
CTGGCGCAGC TGTATGCGGC CGAGGCGCCT GGCGCGGGCG ACAGCAGCGA TGTCTAA
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| Protein sequence | MRLLVIEDNR NMVANLFDYF EARGYTLDAA PDGITGLHLA TTHHYDALIL DWMMPRMDGP
EVLRRLREQH QSELPVIMLT ARDELPDKIA GFRAGADDYL TKPFALPELE VRIEALLARA
HGRRRGKLLQ VADLRLDLAT LEATRAGQVL HLYPACRKLL EVLMQASPAA VTRQRLEQSL
WDDDPPDGDM LRSHIYELRR SVDGPFAEKL IHTLPRLGYR LAQLYAAEAP GAGDSSDV
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