| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04467 |
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| Symbol | raxH |
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| ID | 6304819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1296796 |
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| End bp | 1298058 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642638592 |
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| Product | two-component system (histidine kinase) sensor protein requried for AvrXa21 activity H (raxH) |
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| Protein accession | YP_001912469 |
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| Protein GI | 188575540 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGGTGT GGTTGTTCGG CTACACGCTG TTGATGACGC TGGCGGTGTT CGGCACTGCG
CAGTACCTGC ACGAACGCGC CGAACACGGC GTGTGGCGCT CGTTGCTGAA TTCCGAGCTC
GACAGCATTC TCGAGCGCAG CGTGCAGAAC CCGGATTACC ACTGGCAGGA CTCGGACACC
TTGCGGCTGT ATCACATCGA CGACGTCGCG CGCGCACCAC CGGTCTTGCG CACCCTGCCT
CCGGGCTTGC ACGACGGCCT GGAAATCGCC GGCCGCCAGA GTGCAGTGAT GGTGCGCGAC
ACCGCGCATG CCGGCCGCCT GGCGCTGGTG CTGGACATCA CCGATTTCGA AGCGCTGGAA
AAATTCCTGA CCCGCTGGAT GCTGGCCGCG GGCATCGCGT TGATCGGCAT CACCTTGCTG
ATGGGCACTT ATGCGATGGC TCGGCTGGTG CGCCCGCTGG TTGAACTGGC GCGCGATATC
GGCGGCTTGC GTCCGGAGCA GCGCGCGCAG CAGATTGCGG TCGGGGCGCA AGGCAGTGCC
GAGCTGTACG TGATTGCCGA TGCGCTCAAC GATTATCTTG AGCGCAACAG CCAGTTCGTG
GACCGCGAAC GCGCCTTCAT CGACAGCGCC AGCCACGAAT TGCGCACGCC CATCGCAGTG
ATCGGCAATG CGGTGGAGTT GGCGCTGGAT CAACCCGGCA CGCCGCCGGC GGTACGCCAT
CAACTGCAGC GCATCGCGCA GACCAGTGCC TCGGTCGAAC AGTTGATCAC CTTGCTGCTG
GTGCTGGCCA AGGACCCGGG CCGGCTCGTG CGCAGCGGCG ATTCGTTGCG GCTGGACAAA
CTGCTGCCGG ATATCGTGGC CGACCACACG CATCTGTGCG CCGACAAGGA TCTGCAACTG
GTCCTGGAGG AGCCGCTGCC GCCGTGCAGC TTGGTCGCGC CGGTCGCCAT CGTGCAGACC
GCCATCGGTA ACCTGCTGCG CAACGCCATC GAAAACAGTG ATCGCGGCAT CATCCGCATC
TCGCTATCGG CGCCCGGTGT CGTCCGCATC GCTGACCCGG GCCACGGCAT GACGCCGGAA
GAGATCAGCG CCATCTACAT GCGTCTGGCA CGCGGCAACG CACGCCAGGG CAGTGGCATC
GGGCTGGAAT TGATCGGGCG GTTATGCGAA CACCTGGGCT GGCATCTGCA ACTGGATTCC
AACGCAGGGC AGGGCACGGT GGCGACGCTG GATATGTCCG GCGCTACTGC CACGGCTCGC
TAA
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| Protein sequence | MLVWLFGYTL LMTLAVFGTA QYLHERAEHG VWRSLLNSEL DSILERSVQN PDYHWQDSDT
LRLYHIDDVA RAPPVLRTLP PGLHDGLEIA GRQSAVMVRD TAHAGRLALV LDITDFEALE
KFLTRWMLAA GIALIGITLL MGTYAMARLV RPLVELARDI GGLRPEQRAQ QIAVGAQGSA
ELYVIADALN DYLERNSQFV DRERAFIDSA SHELRTPIAV IGNAVELALD QPGTPPAVRH
QLQRIAQTSA SVEQLITLLL VLAKDPGRLV RSGDSLRLDK LLPDIVADHT HLCADKDLQL
VLEEPLPPCS LVAPVAIVQT AIGNLLRNAI ENSDRGIIRI SLSAPGVVRI ADPGHGMTPE
EISAIYMRLA RGNARQGSGI GLELIGRLCE HLGWHLQLDS NAGQGTVATL DMSGATATAR
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