Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04427 |
Symbol | |
ID | 6304509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1004763 |
End bp | 1005422 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642638284 |
Product | two-component system sensor protein |
Protein accession | YP_001912166 |
Protein GI | 188575237 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGGCAG GCCTGAACCG CCTGATCAAC GAACGCACGC ATATGGTGGC GGCGATCGCA CACGACCTAC GCACACCTCT GGCGCGGCTG TCGTTTCGCC TGGATGGCCT GCAGCCGCCG CTTCGCGACA AGGCGCTGGC CGATATCGAC GAAATGAAGG CGATGATTCC CGCAGCGCTG GACTTCATCC AGAACGATCG TCATCGCGGC GAACGCGCAC CGCTGGATCT GCGCTTGCTG GTGGAGAGCG TGGTCGACAA CGCCACCGAT GTCGGCGCCG ACGCCGAGCT ACTGCCGGGC CCTGAAATCA CCCTGGACGG CGACCCGCTG GCGTTACGCC GCGCAGTGAT GAATCTGCTC GAGAACGCGT TGAAATACGG CAAGCGCGCT CGCCTGCAGT TGCAGCGCGA TGGCGAAGAC GGCGTGTTGT GGATCGACGA CGACGGCCCC GGCATCGCCC CCACCCAACG CGAACAACTC CTGCTGCCAT TCGTGCGTGG CGAGTCCTCG CGCAACCGCG ACACTGGCGG CATCGGGCTG GGTCTGTCGG TGGCGCACAG CATCGTGCTG GCGCACGGCG GCGACCTGCG CCTGGACAAT CGCGCCCGCG GCGGATTGCG AGTGACCGTA CGACTGCCCT GCATGCCAGA GCGACGCTGA
|
Protein sequence | MQAGLNRLIN ERTHMVAAIA HDLRTPLARL SFRLDGLQPP LRDKALADID EMKAMIPAAL DFIQNDRHRG ERAPLDLRLL VESVVDNATD VGADAELLPG PEITLDGDPL ALRRAVMNLL ENALKYGKRA RLQLQRDGED GVLWIDDDGP GIAPTQREQL LLPFVRGESS RNRDTGGIGL GLSVAHSIVL AHGGDLRLDN RARGGLRVTV RLPCMPERR
|
| |