Gene PXO_04393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04393 
Symbol 
ID6304544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp1033537 
End bp1034193 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content68% 
IMG OID642638319 
Producthydrolase CocE/NonD family protein subfamily 
Protein accessionYP_001912201 
Protein GI188575272 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.890391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCAT TGGTGCTGGT GCCGCAGGGG CAGGGTGCCG GGCCGTTTCC GTTGATCGTG 
ATGCCGGCCA GTTGGGCGTT GCCGAATCTG GAATATCTGG GCCGTGCGAC TGCGCTGGCC 
AGCGACGGCT ACGTGGTGGT CAGCTACACC TCGCGCGGGT TTTGGGATTC GGCCGGGCAG 
ATCGATATCG CCGGGCCGGA CAGGGTGGAA GACGTCAGGG CGGTGATCGA TTGGGCACTG 
GCGCACACGC CCGCCAATCC GCATGCGATC GGCGCGTCGG GCATTTCGTA CGGTGCGGGC 
ATCAGCCTGC TGGCGGCCGA GCGCGACCCA CGCATCAAGG CCGTGGCCGC GCTCAGCGGT 
TGGGCCGATC TGCAAGCCTC GCTGTATTCC AATCGCACGG TCAGCCAGCA GGGCGTCGGG 
TTGCCGGTCG GCGCCGGTGC GTTGACCGGG CGGGACGGTC CGGATCTGGC CCAGAGGCGC 
GGTGCAGGGC TTCCTGCCGC AAGCTGCGTC CCCGCAGCCC TGGCTCTGAT GTGGCCGCGC 
TCAATGCGCG TGGCACCGCG GTGCTGCCGG GCAATGCGTT CAACGACGCA TTGTTCCCGC 
CGAACCAGAC CATCGCGTTC TTCAACCAGT TACGTGGCCC CAAGCAACTG CTGCTAA
 
Protein sequence
MGALVLVPQG QGAGPFPLIV MPASWALPNL EYLGRATALA SDGYVVVSYT SRGFWDSAGQ 
IDIAGPDRVE DVRAVIDWAL AHTPANPHAI GASGISYGAG ISLLAAERDP RIKAVAALSG 
WADLQASLYS NRTVSQQGVG LPVGAGALTG RDGPDLAQRR GAGLPAASCV PAALALMWPR 
SMRVAPRCCR AMRSTTHCSR RTRPSRSSTS YVAPSNCC