| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04345 |
|---|
| Symbol | |
|---|
| ID | 6304590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 1082057 |
|---|
| End bp | 1082992 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642638365 |
|---|
| Product | galactose 1-dehydrogenase |
|---|
| Protein accession | YP_001912247 |
|---|
| Protein GI | 188575318 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATC CAGACGCATT GCGCATTGCC CTTGTCGGGA TCGGCAAGAT CGCCCGCGAT
CAGCACGTGC CCACCATCGC TGCGCGCGAT GATGTGCAGT TGGTGGCCAC CGTGAGCCGG
CATGGCATGG TTGATGGTGT GCCGGCCTAC CACTCACTGG AAGAAGCCTT CGCCGCACAG
CCGGAGATCG AGGCGGTGGC CTTGTGCACG CCACCGGTCG GGCGGCACGC CTTGGCGCAG
AGCGCGTTGG CCGCTGGCCG CCATGTATTT CTGGAAAAAC CGCCAGCCGC CACGCTTGCC
GAAATTCATG ACCTACAAGA CGTGGCGCAG CGTGCGCAAC GCAGCCTGTT CACCAGCTGG
CATTCGCGCT GCGCCGCCGG TGTGGCGCCT GCCCGCGCGT GGTTGGCCGA CAAGCAACTC
GTGCGCGCGC ACATCACCTG GAAGGAAGAC ATTCGCCACT GGCATCCGGG CCAGGACTGG
ATTCTCGAAC CCGGCGGTAT GGGCGTGTTC GACCCTGGCA TCAATGCGCT GTCCATCGCG
ACCCATCTGC TGCCGCGCAG CTTCGCGCTG CGCGAAGCCG AGTTGCACAC GCCGGACAAC
CGGCAGGCGC CGCTGTATGC CCGCCTTGCG TTTGTCGACA CCGCAGGCGT CCCTGTGACG
GCCGAATTCG ACTTCCTGCA GAGCGGCCAA CAATGCTGGG ATATCGAAGT GGAGACCACC
GTGGGCATCC TCATGCTCAG TGAAGGCGGG GCCACGTTGA GCATCGATGG GCAGGCCCAG
GTAGTGCCCG CGTCGAGCGA ATACGAGGGT TTGTACCGGC GCTTCGTGCA GTTGGTGCGC
GCCGGTCAAT CGGAAGTGGA TGTCGCACCG TTTTTGCATG TGGCCGATGC GTTCATGCTT
GGTGCGCGCA AGGTCGCCGC ACCGTTCGCG TGGTAA
|
|---|
| Protein sequence | MKHPDALRIA LVGIGKIARD QHVPTIAARD DVQLVATVSR HGMVDGVPAY HSLEEAFAAQ
PEIEAVALCT PPVGRHALAQ SALAAGRHVF LEKPPAATLA EIHDLQDVAQ RAQRSLFTSW
HSRCAAGVAP ARAWLADKQL VRAHITWKED IRHWHPGQDW ILEPGGMGVF DPGINALSIA
THLLPRSFAL REAELHTPDN RQAPLYARLA FVDTAGVPVT AEFDFLQSGQ QCWDIEVETT
VGILMLSEGG ATLSIDGQAQ VVPASSEYEG LYRRFVQLVR AGQSEVDVAP FLHVADAFML
GARKVAAPFA W
|
|---|
| |