Gene PXO_04270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04270 
Symbol 
ID6304413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp899993 
End bp900724 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content63% 
IMG OID642638191 
Productisrso5-transposase protein 
Protein accessionYP_001912073 
Protein GI188575144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.139009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACGAC CCGCTAAACC GTTGGTTGTC AGTGCCGATG ATCGTTTGCA ACTGGAGTCG 
ATGGCCCGAT CGCAAAGTTT GCCGGCGGCC TTGTCGCGCC GCGCACAGAT GATCCTGCGC 
ATGGCCGACG GTGAACCGCA GACGACGATC GCGCATCGCT ATGGCGTGAG CCGCCCGACG 
GTCACGTTGT GGCGTACCCG CTATCGCGAG CGCGGCATTG CCGGCCTGCA TAACGAACTC 
AAGCCCGGCC GGCCGCGCAC GACCAGCGAT GAGAAGGTGG CTGAACTGGT CAACACCGTC 
CTGACGCGCA AGCCGAAAGG TCACACGCAC TGGTCGCGCC GCACGCTGGC GGTCGAGACA 
GGACGTTCCA CCACCACCGT CCACCGCTAC ATGACGCTGT TCGGCCTGCA GCCGCATCGC 
TCCAAGCGCT TCAAGCTCTC CACCGATGCG TTCTTCATCG AGAAGGTGCG CGACATCGTC 
GGCCTGTATC TGAATCCGCC GGATCATGCG TTGGTGCTGT GTGTGGACGA GAAGAGCCAG 
GTACAGGCCT TGGAGCGTAC CCAGCCGGTG CTGCCGATGG GGTTGGGGTA CGTCGAAGGC 
ATCACGCACG ACGACGTGCG CCATGGCACA ACGCCCCTTT TTGCCGCGCT GGACGTCGCC 
AACGGCAGCG TCATCACCCA GTGCAAACCC AGCACCGCCA TCAGGAATTT CTCTCGTTCC 
TGCGACATGT AG
 
Protein sequence
MGRPAKPLVV SADDRLQLES MARSQSLPAA LSRRAQMILR MADGEPQTTI AHRYGVSRPT 
VTLWRTRYRE RGIAGLHNEL KPGRPRTTSD EKVAELVNTV LTRKPKGHTH WSRRTLAVET 
GRSTTTVHRY MTLFGLQPHR SKRFKLSTDA FFIEKVRDIV GLYLNPPDHA LVLCVDEKSQ 
VQALERTQPV LPMGLGYVEG ITHDDVRHGT TPLFAALDVA NGSVITQCKP STAIRNFSRS 
CDM