| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04239 |
|---|
| Symbol | |
|---|
| ID | 6304282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 772419 |
|---|
| End bp | 773168 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642638060 |
|---|
| Product | HAD superfamily hydrolase |
|---|
| Protein accession | YP_001911942 |
|---|
| Protein GI | 188575013 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAC TTGCACAACG CGACGGCCAA GCGATCCAAC TGGTTGGGTT CGACGGCGAC
GATACGCTTT GGAAAAGCGA GGACTATTAC CGCACCGCAG AAGCGGATTT CGAAGCGATT
CTGTCCGGTT ATCTGGATCT GGGCGACAGC CGCATGCAGC AGCATCTGCT GGCGGTGGAG
CGGCGCAACC TCAAGGTGTT CGGTTACGGC GCCAAGGGCA TGACGCTGTC GATGATCGAA
ACCGCAATCG AACTGACCCA GGCGCGCATT GCGGCCCGCG ATATCCAGCG CATCGTCGAA
ATCGGCCGTG CCACGCTGCA GCACCCGGTA GACGTGATTG CCGGTGTGCG CGAGGCAGTC
AGTGCGATTG CCGCCGATTA CGCGGTGGTG CTGATCACCA AGGGCGACCT GTTTCACCAG
GAGCAGAAGA TCGAGCAGTC CGGCCTGGCC GATCTGTTTC CGCGGGTCGA AGTGGTATCC
GAAAAAGATC CGCGGACATA TGCGCGCGTG CTCGGTGAAT TCGACTTGCC GGCGCGGCGA
TTCGTCATGA TTGGTAATTC GCTGCGCTCG GACGTGGAAC CGGTGCTGGC CATCGGCGGC
TGGGGCATCT ACACCCCGTA CGCGGTGACC TGGGCGCACG AGCAGGAGCA TGGTGTGGCC
GCCGCCGAAC CGCGCATGCG CGAAGTGCCC GCCGCCGGCT GGCCGGCAGC AGTGCATGCG
TTGGATGCGT TGGCGCGGCA GCAGCGCTAA
|
|---|
| Protein sequence | MSALAQRDGQ AIQLVGFDGD DTLWKSEDYY RTAEADFEAI LSGYLDLGDS RMQQHLLAVE
RRNLKVFGYG AKGMTLSMIE TAIELTQARI AARDIQRIVE IGRATLQHPV DVIAGVREAV
SAIAADYAVV LITKGDLFHQ EQKIEQSGLA DLFPRVEVVS EKDPRTYARV LGEFDLPARR
FVMIGNSLRS DVEPVLAIGG WGIYTPYAVT WAHEQEHGVA AAEPRMREVP AAGWPAAVHA
LDALARQQR
|
|---|
| |