| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03905 |
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| Symbol | recD |
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| ID | 6303832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 332239 |
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| End bp | 334491 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642637621 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_001911506 |
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| Protein GI | 188574577 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.824272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACC CGAATCTGCT CACTGCGCTC AACCAGAGTG GCGCCCTGCG CACCCTGGAT
CTGGCCTTCG CGCAAAGCCT GCAACGCCTG GAACCGGAGA CCGACCCACA GGTGCTGGCC
GGTGCCGCGC TCGCCTCGCT GGCCGTCACC AGCGGCCACG CCGGGCTGGA CCCCGTCCGC
GCTGCCATGT TGCTGGACGC GCGCGATGGC CCATCGCCCC CATTCCCGGA CCCCGCCGAC
TGGCAACGCT GCCTGGCCGC CTCGCGCTGG GTCGACCAAC CACAGCCCGA AGACCCGGCT
GCCGCCGACC GCCCGCTCGT CCTCGAACGC GGTCTGCTCT ACCTGCGCCG TTACCGCGAG
TACGAACGCC GCCTGGCCCT GGGCCTGCAG CGCATCGCCG CCCAAACCTC GCCCCCCTTC
GCCGCCACCC TGGAGCCGCT GTTCGCACAG TTGTTCCCGC AAGCCACCCC TCTCCCCCGG
GGCGAGGGTG CCCGCAGGGC GGGTGAGGGT AAGGGCCTGC CCGAGCCATC CCTCCAGCAA
GAGGGCACAA ATCCGCCCGT GCTATCCAGC AACGGCACGA ACCAAACAGC ACCATCCCCC
ACCCCAGATC GCCAAGCGCA GGCCGCAGCC CTCGCGCTGC GCCGCGCGCT ACTGCTGGTC
ACCGGCGGCC CCGGCACCGG CAAAACCACC ACCATCGCCC GCCTGTTGTT GCTACGCATC
GCCCAGGCAC ACGCATCCAA CACCCCGGCC CCACGCATCG CCCTGGCCGC ACCCACCGGC
CGCGCCGCCG AGCGCATGGC CGAAAGCCTG CGCGCCGCCG TCGCGCGCGC CATCGCCGAC
GGTATCGACC CCAGCCTGGC CGACGCCCTG CCCACCGGCG CCAGCACGCT GCACCGTCTG
CTCGGCGTCA TTCCGGATTC CCCGCACTTC CGCCACAACG CCGACAACCC GCTGCCATTC
GATCTGATCG TCGTCGACGA AGCCTCCATG GTCGACCTGC CGCTGATGTG CAAACTGGTC
GAAGCCGTCG CCGATGGCAC CCAGCTGATC CTGCTTGGCG ACGCCGACCA GCTGCCCTCG
GTGGAAGCCG GCGACGTGCT CGCCGCCATC CTGCAGGCCG CCGGCCCCGG CGACGCGTTG
CAGCCCGACG ACGCCCAGGC GTTGCAACCG CTGCTCGGCG GCGCGCCTGT GGGCAGTCCA
CGCCCGGTCA CCTCTCACAT CCACACCGGC GGCCTGGCCG GTCACCGCGT GCACCTGCTG
CGTGGCTATC GCCAGGCGGA CGAATTCGCA CTCGCCCCAC TGGCCGACGC CATCCGCGCC
GGCGATGCCG ACACCGCCCT GGCCCTGCTG CGTAGCGGCG AACTGGCCGG CGTGCACTTC
CACGAAGACG GCGAAGACCC GCTGGCACTC GGCCGCGACG CGCTGCTCGC CCACTGGCGC
GCGCTGGCCA CTGCCCGAGA TCCCGCTGCC GCATTGCGCG ACGCAAGCCG CCTACGCCTG
CTCACCGCGG TGCGTGCCGG CCCGCAAGGC GCACGTGGCC TCAACGCCCG CATCGAACAA
CTGCTGGCCG AAACCGGCTC CGGCGCCCGT CGCCTTGGCG GCGCTTCGCC CTGGTTCCAG
GGCCGCCTGC TGCTGATCAC CACAAACAGC TACCGCCACG GCCTGTTCAA CGGCGACGTC
GGCATCTGTC TGCCCAGCGA CCCGCGCGCC TTGCCTGGCC GCAGCGACGC GGGCCCTTCC
CCCGGCCAGG GCGACGCAAG TGCCGTGACC GCGCGCGGCC ACGCGGCACC GTCGTCAAGG
CCGGGCCACG CTGGCGACAG CGCACACCAT GACGCCCCCG CCACCGACAG CCGTGCCCAA
GGCCCCTTGG TCGCCTGGTT CGAAGGCGAC GGCCAGGTGC GCGGCTTCCA CCCCGCCGCA
CTGCCCGCGC ACGAAAGCGC CTTCGCCATG ACCGTGCACA AGGCCCAAGG CAGCGAATTC
GACGAGGTCT GGCTGCAACT GCCTACCCGC GACGCCCGCG TACTCAGCCG CGAACTGCTC
TACACCGGCA TCACCCGCGC CCGCCGCGCC CTGCACCTGG CCGGCAGCGA AGCGGTCATC
CGCGCCGCAC TGGCGCGCCA CGCCGCGCGG ATCTCGGGGT TGGCGTGGCG GTTGGGTGCA
AAAGACGACA AGCCACAGCC CGTTCCAGTA CCCACGCCAG CGCCGCTTCC ACAACCGCCG
CCGAGTGCGC CTGTGCAAGG TGTGCTGTTC TGA
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| Protein sequence | MNHPNLLTAL NQSGALRTLD LAFAQSLQRL EPETDPQVLA GAALASLAVT SGHAGLDPVR
AAMLLDARDG PSPPFPDPAD WQRCLAASRW VDQPQPEDPA AADRPLVLER GLLYLRRYRE
YERRLALGLQ RIAAQTSPPF AATLEPLFAQ LFPQATPLPR GEGARRAGEG KGLPEPSLQQ
EGTNPPVLSS NGTNQTAPSP TPDRQAQAAA LALRRALLLV TGGPGTGKTT TIARLLLLRI
AQAHASNTPA PRIALAAPTG RAAERMAESL RAAVARAIAD GIDPSLADAL PTGASTLHRL
LGVIPDSPHF RHNADNPLPF DLIVVDEASM VDLPLMCKLV EAVADGTQLI LLGDADQLPS
VEAGDVLAAI LQAAGPGDAL QPDDAQALQP LLGGAPVGSP RPVTSHIHTG GLAGHRVHLL
RGYRQADEFA LAPLADAIRA GDADTALALL RSGELAGVHF HEDGEDPLAL GRDALLAHWR
ALATARDPAA ALRDASRLRL LTAVRAGPQG ARGLNARIEQ LLAETGSGAR RLGGASPWFQ
GRLLLITTNS YRHGLFNGDV GICLPSDPRA LPGRSDAGPS PGQGDASAVT ARGHAAPSSR
PGHAGDSAHH DAPATDSRAQ GPLVAWFEGD GQVRGFHPAA LPAHESAFAM TVHKAQGSEF
DEVWLQLPTR DARVLSRELL YTGITRARRA LHLAGSEAVI RAALARHAAR ISGLAWRLGA
KDDKPQPVPV PTPAPLPQPP PSAPVQGVLF
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