Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03856 |
Symbol | |
ID | 6303876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 375683 |
End bp | 378397 |
Gene Length | 2715 bp |
Protein Length | 904 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642637665 |
Product | glucan 1,4-beta-glucosidase |
Protein accession | YP_001911550 |
Protein GI | 188574621 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCCAT CTCTTCACGC CCGACCGCAT CCGCGCAGGC GCCTGCGCTG CGCGCTGCTG GCATTGGCGT GCGGCACCGG CGCGGCCCAT GCCGCGACAC CGCCGCCCTA TCTGCAGACC CAACGCAGTT TCGAACAACG CGCCGCCGAC CTGGTGTCGC GTATGACGCT GGAAGAAAAG GCCGCGCAGA TGCAGAACGC CGCGCCGGCG ATTCCGCGCC TGGGGGTGCC TGCCTACGAT TGGTGGAATG AGGCGCTGCA TGGCGTGGCG CGCGCCGGCG GTGCAACCGT ATTTCCACAG GCGATCGGCA TGGCCGCTAC ATTCGATCTG CCGCTGATGC ACGAGGTCGC CACCGCGATC AGCGATGAGG CGCGCGCCAA GCATCATCGG TTCCTGCGCC AGCATCAGCA CGCGCGCTAT CAAGGGCTGA CCTTCTGGTC GCCGAACATC AATATCTTCC GCGATCCACG CTGGGGCCGC GGGCAGGAGA CTTACGGCGA AGATCCCTTC CTCACCGCGC GCATGGGCGT GACCTTCGTG CAGGGTTTGC AAGGCGAGGG CAGCGACGCA CCGAAGAACG CGCAGGGCGA GCGCTACCGC AAGCTCGACG CTACGGCCAA GCATTTCGCC GTACACAGCG GCCCGGAAGC CGATCGTCAT CACTTCGATG CACGTCCGTC GCAACGCGAT CTTTACGAGA CCTACCTGCC GGCGTTCGAA GCGCTGGTCA AGGACGGCAA GGTAGACGCG GTGATGGGCG CCTACAACCG CGTGTATGGC GAGTCGGCCA GCGCCAGCAA GTTTCTGCTG CAGGATGTGC TGCGCCAGCA GTGGGGCTTC AAGGGCTACG TGGTGTCCGA CTGCTGGGCG ATCGTGGATG TCTGGAAGCA CCACAAGATC GTCGCCACCC GCGAACAAGC CGCCGCACTG GCGGTCACGC ACGGCACCGA GCTGGAATGC GGTGAGGAGT ATTCCACCCT GCCGGCGGCC GTGCACCAAG GCCTGATCGA CGAAGCGCAG ATCGACACCG CCTTGCAGAC CTTGATGACC GCACGCATGC GCCTGGGCAT GTTCGATCCG CCCGGACAGT TGCCGTGGTC GAAGATTCCC GCCTCGGTCA ACCAATCGCC CGCCCACGAT GCGCTGGCGC GACGCACCGC GCGCGAATCG CTGGTGCTGC TGAAGAACGA TGGCCTGCTG CCGTTGTCGC GCGCCACGCT CAAACGCATC GCGGTGATCG GCCCCACCGC CGACGACACC ATGGCGCTGC TCGGCAATTA CTACGGCACG CCGGCTGCGC CGGTCACCGT GTTGCAAGGC ATCCGCGCCG CGGCCCCGAA TGCGCAGGTG CTGTACGCGC GCGGCGCCGA TCTGGTCGAG GGGCGCAATG ATCCCGCCGC CACCCCGCTG ATCGAACCGC ACTACCTGCG GCCATCAGCC AACTCGCCCG AGCGTGGTTT GCGTGGCGAG TACTTTCGCA ATCGCGACTT GTCCGGCAAG CCCGCCTTGG TGCGGGTGGA CGCGCAGATC GGCTTCACGT GGGACCGCGG CTCGCCGACC GACAACCTGC TGGCGCGCGG CGAAGCCGGT CCGAGCGAAG CGGTACCGGC AGATAATTTC AGCATCCGCT GGAGCGGCCA GCTGGTTCCA CCGACCACTG GTACCTACCA CCTGGAAGCA GCGGCCGACG ATGGCGTGCG CCTGTACCTG GATGGCAAGC CGGTGATCGA CCGCTGGAGC ACCAGCGACC GCCTGCACGC CGACGGCGTC GACGTGCAGC TGCAGGCCGG CCGCAGCTAC GACCTGCGAC TGGACTATTT CGAAGGCGAA CGTGATGCCG CCGTACGCCT GGCCTGGCGC CAACCCGGCG CCAAGCCACC GTTGCAGGAA GCGCTGGACG TTGCGCGCAG CGCCGACGTG GTGGTCTTCG TCGGCGGCCT GACCGGGGAT GTCGAAGGCG AGGAGATGAA GGTGAGCTAT CCCGGCTTTG CCGGCGGCGA CCGCACCGAC CTGCGCCTGC CCAAGCCGCA GCGCGAACTG CTCGAAGCCC TGCAAGCCAC CGGCAAACCG GTGGTGGCAG TGCTGACCGC CGGCTCGGCG CTGGCCATCG ATTGGGCGCA GCAACACGTG CCCGCCATCC TGCTGGCCTG GTATCCCGGC CAGCGCGGCG GAACCGCGGT GGCCGACACA CTGTTCGGCG ATGCCAATCC TGGCGGTCGG CTACCGGTGA CGTTCTACAA GGAAAGCGAA ACCCTGCCGG CGTTCGACGA CTACGCCATG CATGGCCGCA CCTACCGCTA CTTCGGCGGC ACGCCGCTGT ATCCGTTCGG CCACGGCTTG TCGTACACGC AGTTCGCCTA TTCCGATCTG CGCCTTGATC GCAGCACGTT GACGGCTGAT GGTGCGCTCA CGGCCACGGT CGCAGTGAAG AACACCGGCC AACGCGCAGG CGATGAGGTG GTGCAGCTGT ATCTGCATCC GCTCAAGCCG CAACGCGAAC GTGCCGGCAA AGAGTTGCGT GGCTTTCAAC GCCTCGCCCT GCAACCGGGC CAACAACGCG AGCTACGCTT CACCATCAAC GCAAAGGATG CGCTGCGCAT CTACGACGCG CAGCGCAAGG CGTACACGGT AGACCCGGGC GCCTACGAAG TGCAGATCGG CGCTTCCAGT GCGGATATCC GCGCCAGGCA GCGCTTCACC GTGACCGACA AGTAG
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Protein sequence | MDPSLHARPH PRRRLRCALL ALACGTGAAH AATPPPYLQT QRSFEQRAAD LVSRMTLEEK AAQMQNAAPA IPRLGVPAYD WWNEALHGVA RAGGATVFPQ AIGMAATFDL PLMHEVATAI SDEARAKHHR FLRQHQHARY QGLTFWSPNI NIFRDPRWGR GQETYGEDPF LTARMGVTFV QGLQGEGSDA PKNAQGERYR KLDATAKHFA VHSGPEADRH HFDARPSQRD LYETYLPAFE ALVKDGKVDA VMGAYNRVYG ESASASKFLL QDVLRQQWGF KGYVVSDCWA IVDVWKHHKI VATREQAAAL AVTHGTELEC GEEYSTLPAA VHQGLIDEAQ IDTALQTLMT ARMRLGMFDP PGQLPWSKIP ASVNQSPAHD ALARRTARES LVLLKNDGLL PLSRATLKRI AVIGPTADDT MALLGNYYGT PAAPVTVLQG IRAAAPNAQV LYARGADLVE GRNDPAATPL IEPHYLRPSA NSPERGLRGE YFRNRDLSGK PALVRVDAQI GFTWDRGSPT DNLLARGEAG PSEAVPADNF SIRWSGQLVP PTTGTYHLEA AADDGVRLYL DGKPVIDRWS TSDRLHADGV DVQLQAGRSY DLRLDYFEGE RDAAVRLAWR QPGAKPPLQE ALDVARSADV VVFVGGLTGD VEGEEMKVSY PGFAGGDRTD LRLPKPQREL LEALQATGKP VVAVLTAGSA LAIDWAQQHV PAILLAWYPG QRGGTAVADT LFGDANPGGR LPVTFYKESE TLPAFDDYAM HGRTYRYFGG TPLYPFGHGL SYTQFAYSDL RLDRSTLTAD GALTATVAVK NTGQRAGDEV VQLYLHPLKP QRERAGKELR GFQRLALQPG QQRELRFTIN AKDALRIYDA QRKAYTVDPG AYEVQIGASS ADIRARQRFT VTDK
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