| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03776 |
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| Symbol | tatD |
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| ID | 6303950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 461892 |
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| End bp | 462704 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642637737 |
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| Product | deoxyribonuclease TatD |
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| Protein accession | YP_001911622 |
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| Protein GI | 188574693 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTGA TCGATATCGG CGCCAACCTC ACCCACGACT CGTTCGACCG TGATCGCGAT
GCGGTGCTGC AGCGCGCACG CGATGCCGGC GTGGGGCAGC TGGTGATCAC CGGCGCCAGC
CGCGAGCATT CGCCACTGGC CTTGCAACTG GCGCAGCAAC ACCCCGGATT CCTGTACGCC
ACCGCCGGTG TGCACCCGCA CCATGCGGTG GAATGCACCG CCGAATGCGA AGCGGAAATG
CGCACGCTGC AGGCGCATTC GCAGGTGGTG GCCGTGGGTG AGTGCGGGCT GGATTACTTC
CGCGATTTCG CGCCGCGCCC GGCGCAGCAC AAGGCGTTCG AACGCCAGCT GCAGTTGGCT
GCCGATAACG GCAAGCCGCT GTTCCTGCAC CAGCGCGACG CGCATGAAGA TTTCCTCGCC
ATCATGCGCA GCTTCGAAGG CCGCCTGGGT GCCGCGGTGG TGCATTGCTT CACCGGCACG
CGCGAGGAAC TGTTTGCGTA TCTGGACCGC GATTACTACA TCGGCATCAC CGGCTGGCTC
TGCGACGAAC GCCGCGGCGC GCATCTGCGC GAGCTGGTGC GCAACATTCC GGCCAACCGC
TTGATGATCG AGACCGATGC GCCGTACCTG CTGCCGCGCA CGCTCAAGCC GATGCCCAAG
GACCGCCGCA ACGAGCCGAT GTTCCTATCG CATATCGTGG AAGAACTGGC ACGCGATCGT
GGCGAAGATG TGGCGGTGAC CGCTGCCAAC AGCACGGCAG CGGCACGTGC CTTCTTCCGC
TTGCCGGAGC CTGCCGGCGC GAAGGGCAGC TGA
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| Protein sequence | MQLIDIGANL THDSFDRDRD AVLQRARDAG VGQLVITGAS REHSPLALQL AQQHPGFLYA
TAGVHPHHAV ECTAECEAEM RTLQAHSQVV AVGECGLDYF RDFAPRPAQH KAFERQLQLA
ADNGKPLFLH QRDAHEDFLA IMRSFEGRLG AAVVHCFTGT REELFAYLDR DYYIGITGWL
CDERRGAHLR ELVRNIPANR LMIETDAPYL LPRTLKPMPK DRRNEPMFLS HIVEELARDR
GEDVAVTAAN STAAARAFFR LPEPAGAKGS
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