| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03406 |
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| Symbol | epaP |
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| ID | 6303595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 69110 |
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| End bp | 69754 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642637389 |
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| Product | type III secretion system protein |
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| Protein accession | YP_001911274 |
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| Protein GI | 188574345 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.257955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGATGC CTGACGTTGG CTCGCTGCTG CTGGTGGTCA TCATGCTGGG CTTGCTGCCC
TTCGCAGCGA TGGTGGTCAC CTCCTACACC AAGATCGTGG TCGTGCTCGG CTTGCTGCGC
AATGCGATCG GGGTGCAGCA GGTGCCGCCC AACATGGTCC TCAATGGCGT TGCATTGCTG
GTGTCGTGCT TTGTGATGGC GCCGGTGGGC ATGGAGGCGT TCAAGGCCGC ACAGAACTAC
GGTGCCGGGT CGGATAACAG CCGCATTGTG GTGCTGCTCG ACGCCTGCCG GGAGCCCTTT
CGGCAATTCC TCCTCAAGCA TACACCGGAG CGCGAAAAGG CATTTTTCAT GCGTTCTGCA
CAGCAGATCT GGCCCAAGGA CAAGGCCACC ACGCTCAAGT CGGACGACTT GCTTATCTTG
GCACCGGCAT TCACGCTCAG CGAATTGACC GAAGCCTTCC GCATCGGGTT TCTGTTGTAT
CTGGTGTTTA TCGTCATCGA CCTGGTGGTG GCAAACGCGC TGATGGCGAT GGGCCTTTCG
CAGGTCACAC CGACCAATGT GGCGATCCCG TTCAAGCTGC TGCTGTTTGT CGCTATGGAC
GGCTGGTCGA TGCTGATTCA TGGCCTGGTT CTGAGCTATC GGTGA
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| Protein sequence | MQMPDVGSLL LVVIMLGLLP FAAMVVTSYT KIVVVLGLLR NAIGVQQVPP NMVLNGVALL
VSCFVMAPVG MEAFKAAQNY GAGSDNSRIV VLLDACREPF RQFLLKHTPE REKAFFMRSA
QQIWPKDKAT TLKSDDLLIL APAFTLSELT EAFRIGFLLY LVFIVIDLVV ANALMAMGLS
QVTPTNVAIP FKLLLFVAMD GWSMLIHGLV LSYR
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