Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03378 |
Symbol | |
ID | 6303628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 97149 |
End bp | 98681 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642637422 |
Product | Putative signal protein with GGDEF domain |
Protein accession | YP_001911307 |
Protein GI | 188574378 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCACACCG TGATCAACGG CGAGCGCGGC GGCCAGGGCC TGGCCGCGCA TCAACTGGTA CCGGCCAAGG CCAAGTCCGG CGCACACGAT CCCGCCGCCG CCACCGCATT GCTGATACGG CTGTTTTCGC ATGCCGCGCA TCCGGAGGCA CTGCTGCTCG CCTTCGCCGA AGGCATCACC AGCCTGCACG GCGAACTCGG CGACATGGGT GTGCGCCTGA GCGCGGCCTA TGCGGCGGGC GACTGGCCCG GCTACGGCCG TGCCTTGCGT CAGCTGATCG ACAAGTACAT CCGCACCATC GACATTGGCG ATTCGCTGGC CGAAGGCCGC ACCGAGGCCG AGCAACTGCG CGATCTGTTG CGCCACGCAC TAGGCAATGC ACTGGCCACC CTGTTGCAGC GCAGCCCGGA GCTGGCCGAA GAGGCGCAGA CGCTGGCATC GGCGCTGCGC CATTGGCGCC CGGGCCACGA GTTGCTCACG CTGGAACAGC GCCTGCGCGA GCTCAGCCAT CAGATCGGCC TGCGTGCCGA AGATGCCAGC GAACAGCAGA ACCTGTTATT GGGCTTATTC GATCTGTTGC TGGAGAACGT CGGCGAACTC CTCGATGATC GCAGCTGGTT GCAAGGCCAG ATCTCGGTGG TGCGGCAGCT GATTTCCGGC CCGCTGGACG TCAGCTCCAT CGAACAAGCC CGCGGCACCT TGCGCGAGGT GATCTACAAA CAAGGCCTGC TCAAACAGGG CATCGCCGAG TCCAAGACCG CCATGCGCGA AATGATGGTG TCCTTCGTCG ATCGGCTGGA TGGCATGGCC ACCAGCACCG GCGAATACCA TGACCGCGTG GCCGGTTATT CGCAGGCGAT TGGCGAAGCA CGCGGCATTC CCGACCTCAA CCGGCTGCTG CAGGATCTGC TGCAGGACAC CGCCGGTGTG CAGGCACAGG CGCTGGCGGC GCGCGACGAG CTGCTTTCGG CACGGCGGCA GGTGGAAGAT TGCGAACAAC GCATCGCCTC GCTCGAGCAG GAGCTCAAGG ACGTGGCCGG CCTGGTGCGC GAAGACCAGC TCACGGGCGC GCTCAACCGA CGCGGCTTTG AAGAACTGTT CCAGCGCGAA GCGGTGCGCA CCCAGCGCAG CGGCCAGCCG CTGTGCGTGG CGATGCTGGA CCTGGACGAT TTCCGCCGCC TCAACGAGAC CCACGGCCAC GCCGGCGGCG ACGCCGCGCT GCGCCACACC GTGGACGTGG CCAAGGCCGT GCTGCGCACC ACCGACGCCA TCGCCCGCTT CGGCGGCGAA GAATTCGTCC TGCTGCTGCC GGATTCGACC ATCTTCGAAG CCAGCGCGGC AGTGATCCGC CTGCAGCGCG CATTGTCGCA ACGCTCGCTG CTGCATGACG ACGTGCGCGT GTTCATCAGC TTCAGTGCCG GCGTGGCACT CCGCGGGACC GACGAAACCC AGGACGACGT CATCCGCCGC GCCGACCGCG CCATGTACGA CGCCAAGTCG GCCGGCAAGA ACCGGGTGAT CAACGCCGAT TAA
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Protein sequence | MHTVINGERG GQGLAAHQLV PAKAKSGAHD PAAATALLIR LFSHAAHPEA LLLAFAEGIT SLHGELGDMG VRLSAAYAAG DWPGYGRALR QLIDKYIRTI DIGDSLAEGR TEAEQLRDLL RHALGNALAT LLQRSPELAE EAQTLASALR HWRPGHELLT LEQRLRELSH QIGLRAEDAS EQQNLLLGLF DLLLENVGEL LDDRSWLQGQ ISVVRQLISG PLDVSSIEQA RGTLREVIYK QGLLKQGIAE SKTAMREMMV SFVDRLDGMA TSTGEYHDRV AGYSQAIGEA RGIPDLNRLL QDLLQDTAGV QAQALAARDE LLSARRQVED CEQRIASLEQ ELKDVAGLVR EDQLTGALNR RGFEELFQRE AVRTQRSGQP LCVAMLDLDD FRRLNETHGH AGGDAALRHT VDVAKAVLRT TDAIARFGGE EFVLLLPDST IFEASAAVIR LQRALSQRSL LHDDVRVFIS FSAGVALRGT DETQDDVIRR ADRAMYDAKS AGKNRVINAD
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