| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03378 |
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| Symbol | |
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| ID | 6303628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 97149 |
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| End bp | 98681 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642637422 |
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| Product | Putative signal protein with GGDEF domain |
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| Protein accession | YP_001911307 |
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| Protein GI | 188574378 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCACACCG TGATCAACGG CGAGCGCGGC GGCCAGGGCC TGGCCGCGCA TCAACTGGTA
CCGGCCAAGG CCAAGTCCGG CGCACACGAT CCCGCCGCCG CCACCGCATT GCTGATACGG
CTGTTTTCGC ATGCCGCGCA TCCGGAGGCA CTGCTGCTCG CCTTCGCCGA AGGCATCACC
AGCCTGCACG GCGAACTCGG CGACATGGGT GTGCGCCTGA GCGCGGCCTA TGCGGCGGGC
GACTGGCCCG GCTACGGCCG TGCCTTGCGT CAGCTGATCG ACAAGTACAT CCGCACCATC
GACATTGGCG ATTCGCTGGC CGAAGGCCGC ACCGAGGCCG AGCAACTGCG CGATCTGTTG
CGCCACGCAC TAGGCAATGC ACTGGCCACC CTGTTGCAGC GCAGCCCGGA GCTGGCCGAA
GAGGCGCAGA CGCTGGCATC GGCGCTGCGC CATTGGCGCC CGGGCCACGA GTTGCTCACG
CTGGAACAGC GCCTGCGCGA GCTCAGCCAT CAGATCGGCC TGCGTGCCGA AGATGCCAGC
GAACAGCAGA ACCTGTTATT GGGCTTATTC GATCTGTTGC TGGAGAACGT CGGCGAACTC
CTCGATGATC GCAGCTGGTT GCAAGGCCAG ATCTCGGTGG TGCGGCAGCT GATTTCCGGC
CCGCTGGACG TCAGCTCCAT CGAACAAGCC CGCGGCACCT TGCGCGAGGT GATCTACAAA
CAAGGCCTGC TCAAACAGGG CATCGCCGAG TCCAAGACCG CCATGCGCGA AATGATGGTG
TCCTTCGTCG ATCGGCTGGA TGGCATGGCC ACCAGCACCG GCGAATACCA TGACCGCGTG
GCCGGTTATT CGCAGGCGAT TGGCGAAGCA CGCGGCATTC CCGACCTCAA CCGGCTGCTG
CAGGATCTGC TGCAGGACAC CGCCGGTGTG CAGGCACAGG CGCTGGCGGC GCGCGACGAG
CTGCTTTCGG CACGGCGGCA GGTGGAAGAT TGCGAACAAC GCATCGCCTC GCTCGAGCAG
GAGCTCAAGG ACGTGGCCGG CCTGGTGCGC GAAGACCAGC TCACGGGCGC GCTCAACCGA
CGCGGCTTTG AAGAACTGTT CCAGCGCGAA GCGGTGCGCA CCCAGCGCAG CGGCCAGCCG
CTGTGCGTGG CGATGCTGGA CCTGGACGAT TTCCGCCGCC TCAACGAGAC CCACGGCCAC
GCCGGCGGCG ACGCCGCGCT GCGCCACACC GTGGACGTGG CCAAGGCCGT GCTGCGCACC
ACCGACGCCA TCGCCCGCTT CGGCGGCGAA GAATTCGTCC TGCTGCTGCC GGATTCGACC
ATCTTCGAAG CCAGCGCGGC AGTGATCCGC CTGCAGCGCG CATTGTCGCA ACGCTCGCTG
CTGCATGACG ACGTGCGCGT GTTCATCAGC TTCAGTGCCG GCGTGGCACT CCGCGGGACC
GACGAAACCC AGGACGACGT CATCCGCCGC GCCGACCGCG CCATGTACGA CGCCAAGTCG
GCCGGCAAGA ACCGGGTGAT CAACGCCGAT TAA
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| Protein sequence | MHTVINGERG GQGLAAHQLV PAKAKSGAHD PAAATALLIR LFSHAAHPEA LLLAFAEGIT
SLHGELGDMG VRLSAAYAAG DWPGYGRALR QLIDKYIRTI DIGDSLAEGR TEAEQLRDLL
RHALGNALAT LLQRSPELAE EAQTLASALR HWRPGHELLT LEQRLRELSH QIGLRAEDAS
EQQNLLLGLF DLLLENVGEL LDDRSWLQGQ ISVVRQLISG PLDVSSIEQA RGTLREVIYK
QGLLKQGIAE SKTAMREMMV SFVDRLDGMA TSTGEYHDRV AGYSQAIGEA RGIPDLNRLL
QDLLQDTAGV QAQALAARDE LLSARRQVED CEQRIASLEQ ELKDVAGLVR EDQLTGALNR
RGFEELFQRE AVRTQRSGQP LCVAMLDLDD FRRLNETHGH AGGDAALRHT VDVAKAVLRT
TDAIARFGGE EFVLLLPDST IFEASAAVIR LQRALSQRSL LHDDVRVFIS FSAGVALRGT
DETQDDVIRR ADRAMYDAKS AGKNRVINAD
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