| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03341 |
|---|
| Symbol | |
|---|
| ID | 6303669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 143510 |
|---|
| End bp | 144667 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642637462 |
|---|
| Product | ABC transporter permease |
|---|
| Protein accession | YP_001911347 |
|---|
| Protein GI | 188574418 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACT TCTCGCTCGT ATGGGCGCAG CTGTTCCGCA GCGAGACGCG GACGCTGCTG
ACCCTGCTGT CGGTGGTCGC TGCATTCCTG TTGTTCGGCA TGCTCGATTC GGTGCGTGTG
GCGTTCAATT CCGGCGGCAG CATCGAAGGC GTCAACCGCC TGGTGGTGAC CTCGCGCCTG
TCGATCACTC AGTCGCTGCC GATCCGCCTG GGTACGCAGA TACGCGAGGT GGCCGGGGTG
CGCGATGTGA CCTCGGCGAT ATGGTTCGGT GGCATCTATA AAGATCCGAA GAACTTCTTC
GCCAACTCCT CGGTGGCTCC GAACTACTTC GACGTCTACC GTGAACTGCA GATTCCTCCA
GAACAGCTGA AGGCGTTCCA TACCACACGC GCCGGCGCGA TCGTTGGCGA ATCGCTGGCC
AAAGAGTTCG GCTGGAAGCT CGGCGACACC ATCCCACTGC AGGCGACGCT CTTCCCACGC
GGCGGCAGCA ATAACTGGCC GCTGGAACTG GTCGGCATCT TCCGCTCCAA GGACCGCACG
CTGGCCGCCA ACGAGGAACG CCAGCTGATG ATGAATTGGA AGTACTTTGA TGAATCCAAT
GACTACATCA AAAACAAGGT CAGCTGGTAC ACGGTGACGC TGGACAACCC CGACCATGCC
TCGCGCGTTG CGCAGGCGAT CGATGCGATC TCGGCCAACT CCGATCACGA AACCAAGAGC
CAGACCGAAT CGGCATTTCA ACAGGCCTTC GTTAAGCAGT TCGCCGACAT CGGCATGATC
GTCACCTCGA TCATGGGCGC GGTGTTCTTC ACACTGCTGC TGTTGACCGG CAACACCATG
GCCCAGGCGG TACGCGAGCG CATCCCGGAA CTGGCGACGC TGAAGACGCT CGGCTTCAAG
GACGGCACGC TGCTGACTCT GGTGATGGTC GAATCGGTGC TACTGATTGG GCTCGGTGGT
GCGACCGGAC TGGGTCTTGC GGCGTTGATC CTGCCGGGGC TGGCGTCAAA GGCAATGGGC
ATGCTGCCTC CGAACGTGCC ACTTCAAACC TGGCTGGTCG GTGCCGGGCT GATCGTGGTG
ATCGGCGTGG TAGTCGGCGT GCTGCCGGCG CTACGCGCGA AGCGTCTGAA GATCGTCGAT
GCCCTGGCTG GGCGCTGA
|
|---|
| Protein sequence | MKYFSLVWAQ LFRSETRTLL TLLSVVAAFL LFGMLDSVRV AFNSGGSIEG VNRLVVTSRL
SITQSLPIRL GTQIREVAGV RDVTSAIWFG GIYKDPKNFF ANSSVAPNYF DVYRELQIPP
EQLKAFHTTR AGAIVGESLA KEFGWKLGDT IPLQATLFPR GGSNNWPLEL VGIFRSKDRT
LAANEERQLM MNWKYFDESN DYIKNKVSWY TVTLDNPDHA SRVAQAIDAI SANSDHETKS
QTESAFQQAF VKQFADIGMI VTSIMGAVFF TLLLLTGNTM AQAVRERIPE LATLKTLGFK
DGTLLTLVMV ESVLLIGLGG ATGLGLAALI LPGLASKAMG MLPPNVPLQT WLVGAGLIVV
IGVVVGVLPA LRAKRLKIVD ALAGR
|
|---|
| |