Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03282 |
Symbol | |
ID | 6308524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 5114415 |
End bp | 5114972 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642642239 |
Product | hypothetical protein |
Protein accession | YP_001916064 |
Protein GI | 188579135 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.26871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGGGGAC ATCGCGGCGA CAACGACCAC CGCCTGACCT ACATTCACCT GGGCATCGTC GCCAGCCTGC TGCTGAACTC CAAGGCGGTG GATTTCGTGG TCGCTGGTTG CGGCACCGGC CAGGGCGCGA TGATGTCGCT CAACGCGCAC CCGGGCGTGT TTTGCGGCTA CTGCATCGAG CCGACTGACG CCTACCTGTT CGCCCAGGTC AACAACGGCA ACGCGCTGTC GCTGGCCTTC GCCAAGGGCT ACGGCTGGGG CGCGGAAATC AACGTGCGCT ACATCTTCGA AAAGGCCTTC AGCGGCGAGC GCGGCATGGG CTACCCGGCC GAGCGTCGCG AATCGCAGGC GGCCAACGCC GGCATCCTGA CCCAGGTCAA GCAGGCCACC GCCAAGTCGT ACCTGGACGG CCTGCGCGCC ATCGACCCGG AACTGATCAA GCAGGCCATC GGCGGCGCGC GTTTCCAGCA GTGTTTCTTC GAGAACGCGC AGGATGCGGA AATCCGCAAC TTTGTCGCCG GCCTGCTGGG GAAGACTGAA GCCGCTGCTG CCGCGTAA
|
Protein sequence | MGGHRGDNDH RLTYIHLGIV ASLLLNSKAV DFVVAGCGTG QGAMMSLNAH PGVFCGYCIE PTDAYLFAQV NNGNALSLAF AKGYGWGAEI NVRYIFEKAF SGERGMGYPA ERRESQAANA GILTQVKQAT AKSYLDGLRA IDPELIKQAI GGARFQQCFF ENAQDAEIRN FVAGLLGKTE AAAAA
|
| |