Gene PXO_02846 details

Gene Information

• Locus tag: PXO_02846
• Symbol: tmk
• ID: 6308349
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 4956263
• End bp: 4956946
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 642642072
• Product: thymidylate kinase
• Protein accession: YP_001915903
• Protein GI: 188578974
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAATTG AACTGAAGCC CGGCGGCTTG CTGATCGCCA TCGAAGGCAT CGACGGCGCC 
GGCAAGACCA CCCTCGCCCG CCGCCTGACC ACCACGCTGG AAGCCGCTGG CGCGCGCGTC 
GTGCTGAGCA AGGAGCCGAC CAACGGCCCC TGGGGCACCA AACTGCGCCA GTCCGCCGCC 
ACCGGCCGCC TGAGTGCGGA CGAAGAAGCC GAGCTGCTGA TCCGCGACCG CCACGAACAT 
GTGGACACCT TGATCGCGCC CGCGCTGGCA CGTGGCGACA TCGTGATCCT AGACCGCTAC 
TTCCCCTCGA TGGTCGCCTA CCAGGGCGCT GCCGGCCTGC CGCTGGACGA GCTACTGGAA 
CTCAACGCCT TCGCGCCGCG CCCGGACGTA CTGCTGCTGC TCGACCTGCC CCCGCCCACC 
GGCCTGGCCC GTATCCGCGC GCGCGGCGAT GCGCCCAATC ACTTCGAAAC CCAAGACAAC 
CTGGAACGCT GCCGCACCAT CTTTGCCGGG CTGGAATTGC CGGGCAAACA CGTGGTGGAT 
GCCAGCGCCG ACGCCGACAG CGTGCTGCGC CAGGCGCACG CCATCATCGT GGCCGCATTA 
GCCGACCGAC TGAGCGGCGA CGGCGCGCCG GCAGACACCG GCAAGGCCGC GCTGGAACTG 
CTCTCGGCCG GCCGCCCGGC CTGA 

 

Protein sequence

MTIELKPGGL LIAIEGIDGA GKTTLARRLT TTLEAAGARV VLSKEPTNGP WGTKLRQSAA 
TGRLSADEEA ELLIRDRHEH VDTLIAPALA RGDIVILDRY FPSMVAYQGA AGLPLDELLE 
LNAFAPRPDV LLLLDLPPPT GLARIRARGD APNHFETQDN LERCRTIFAG LELPGKHVVD 
ASADADSVLR QAHAIIVAAL ADRLSGDGAP ADTGKAALEL LSAGRPA