| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02696 |
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| Symbol | cas |
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| ID | 6307936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 4539663 |
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| End bp | 4540697 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642641665 |
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| Product | crispr-associated protein Cas1 |
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| Protein accession | YP_001915502 |
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| Protein GI | 188578573 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03640] CRISPR-associated endonuclease Cas1, DVULG subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.512018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGCC AACTCAACAC ACTGTATGCC ACCACAGACG GTGCCTGGCT GCGCAAGGAC
GGCGCGAACA TCGTCATGGA GGTGGAGCGG CAGGAGCGCG CACGCCTGCC CGTGCACATG
CTCGAGAGCC TGGTCTGCAT CGGCCGCGTC GCGGTGTCGC CGCAACTGCT CGGCTTCTGC
AGCGAACACG GCATCAGCAT CTGCTACCTG ACGCCGCAGG GGCGTTTCCT GGCGCGGGTC
GAAGGGCCGG TCTCCGGCAA CGTGCTGCTG CGGCGCGCAC AGTACCGGCG CAGCGACGAT
CCCGCAGGTT GCGCCGCCAT TGTCCGCCAC CTGCTGGCCG GCAAGATCCA CAACCAGCGC
GCGGTCTTGG CGCGCGGCTG GCGCGATCAC GGCGACTGCC TGACCGACGT GGCCGCCTTC
CAGCACTCTT TGAAGCGGCT CAAGCGTATC CCACAGCGCG TTCTGGTCGA GACCGACGTG
GACGTGCTGC GCGGCCTGGA AGGCGAGGCG GCGCAGTCCT ACTTCGGTGT GTTCGGACAG
CTGGTGCGTG CCGACAAGCC ACTTCTGCGC TTCGGCGGAC GCAATCGCCG CCCTCCGCGC
GACGCCTTCA ATGCCCTGCT CTCCTTCCTC TATACCCTGC TCACACACGA CTGCCGCTCC
GCCCTGGAGT CGGTCGGCCT GGACCCGGCG GTGGGCTTTC TGCATCGCGA CCGGCCCGGG
CGACCGAGCC TGGCGCTGGA CTTGGCCGAA GAGTTCCGCC CCTTGCTCGG CGAACGTCTG
GCACTTTCGT TGATCAATCG CCGGCAATTG AACGAACGCG ACTTCCAGGT GTTCGACAAC
GGCGCGGTCC TGCTCAAGGA TGACTCGCGT AAGACCGTGC TGATCGCCTA CCAGGAGCGC
AAGCGCGAAC AACTGCAGCA TGCCTTTCTG GGAGAAAAGG TCGACATCGG CTTGCTACCG
TTCGTCCAGG CGCAGCTGCT TGCGCGGCAT CTGCGCGGGG ACCTGGATGG CTACCCGGCG
TTCTTCTGGA AGTAA
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| Protein sequence | MRRQLNTLYA TTDGAWLRKD GANIVMEVER QERARLPVHM LESLVCIGRV AVSPQLLGFC
SEHGISICYL TPQGRFLARV EGPVSGNVLL RRAQYRRSDD PAGCAAIVRH LLAGKIHNQR
AVLARGWRDH GDCLTDVAAF QHSLKRLKRI PQRVLVETDV DVLRGLEGEA AQSYFGVFGQ
LVRADKPLLR FGGRNRRPPR DAFNALLSFL YTLLTHDCRS ALESVGLDPA VGFLHRDRPG
RPSLALDLAE EFRPLLGERL ALSLINRRQL NERDFQVFDN GAVLLKDDSR KTVLIAYQER
KREQLQHAFL GEKVDIGLLP FVQAQLLARH LRGDLDGYPA FFWK
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