Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02548 |
Symbol | |
ID | 6307794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 4400085 |
End bp | 4400555 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642641528 |
Product | hypothetical protein |
Protein accession | YP_001915366 |
Protein GI | 188578437 |
COG category | [S] Function unknown |
COG ID | [COG3305] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.360557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCACCA AACCCTATAG CCCGGATCCG CGCGCGCATC CGGGACTGCA TGTGATCGCC TTGCTTGAAG CGGTCAAGGG AACGCTTGCG CTGTTGGCGG CGACGGGCCT GGAACTTCTG GGCCCGCTCC CGCTGCAACA CGCGGTCATC ACCCTGATCC GCCGCTTCAA TCTGGACCCG GACCACGGCG CACTGCCGTC GTTGCTCAAG ACCATCAGCC CCGATGCGGT GCATCTGGCC GCTGCCGCAA TGCTGGCCTA TGGCCTGCTG CACGTGGTGG AAGCCTGGGG TCTGTGGCGT GCCAAGGCGT GGGCCTCGGT GCTGGGCTGC CTGTCGGCGG CCATCTATCT ACCCTTCGAT ATCTACGCCA TCGCGCGTCA CCCCGGCTGG ACCGCCTGGG CCGTGCTGGC GATCAATTTG CTCGTGGTCG GCGTGCTGGC ACGCGACCTG GTACGTCGCC GCCGGCGCTG A
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Protein sequence | MSTKPYSPDP RAHPGLHVIA LLEAVKGTLA LLAATGLELL GPLPLQHAVI TLIRRFNLDP DHGALPSLLK TISPDAVHLA AAAMLAYGLL HVVEAWGLWR AKAWASVLGC LSAAIYLPFD IYAIARHPGW TAWAVLAINL LVVGVLARDL VRRRRR
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