Gene PXO_02548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_02548 
Symbol 
ID6307794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp4400085 
End bp4400555 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content67% 
IMG OID642641528 
Producthypothetical protein 
Protein accessionYP_001915366 
Protein GI188578437 
COG category[S] Function unknown 
COG ID[COG3305] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.360557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACCA AACCCTATAG CCCGGATCCG CGCGCGCATC CGGGACTGCA TGTGATCGCC 
TTGCTTGAAG CGGTCAAGGG AACGCTTGCG CTGTTGGCGG CGACGGGCCT GGAACTTCTG
GGCCCGCTCC CGCTGCAACA CGCGGTCATC ACCCTGATCC GCCGCTTCAA TCTGGACCCG
GACCACGGCG CACTGCCGTC GTTGCTCAAG ACCATCAGCC CCGATGCGGT GCATCTGGCC
GCTGCCGCAA TGCTGGCCTA TGGCCTGCTG CACGTGGTGG AAGCCTGGGG TCTGTGGCGT
GCCAAGGCGT GGGCCTCGGT GCTGGGCTGC CTGTCGGCGG CCATCTATCT ACCCTTCGAT
ATCTACGCCA TCGCGCGTCA CCCCGGCTGG ACCGCCTGGG CCGTGCTGGC GATCAATTTG
CTCGTGGTCG GCGTGCTGGC ACGCGACCTG GTACGTCGCC GCCGGCGCTG A
 
Protein sequence
MSTKPYSPDP RAHPGLHVIA LLEAVKGTLA LLAATGLELL GPLPLQHAVI TLIRRFNLDP 
DHGALPSLLK TISPDAVHLA AAAMLAYGLL HVVEAWGLWR AKAWASVLGC LSAAIYLPFD
IYAIARHPGW TAWAVLAINL LVVGVLARDL VRRRRR