Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02416 |
Symbol | |
ID | 6307651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 4264570 |
End bp | 4266486 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642641388 |
Product | alpha-amlyase |
Protein accession | YP_001915236 |
Protein GI | 188578307 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCT CCCCGATCAA TTCCACCATA CTGCGCGCGG CCTTTGCCGC GCCGCTGGAT CCGCAACGCG CCGCCATTGT GATGGCGCGC TACGACCAGC ACGCACCGCG TTTGCTGGAT GCCTTGCAGA CGTTGTACGG CCAGCGGGCC CACTATGCGC CGTGGTTGAC GCAGTGGCTG GGAGAACTGG GCGATCTCGC CCGGCAACGC CCGCAAGCGC TGCAGACCCT CGACAGCACA CGGCACGCCG GTTGGTTCGG CGAACAGCAC ATGCTCGGCT ACAGCGCCTA CGCAGACCGC TTTGCCGGCA CGCTGCAGGG CGTGGCCGAA CGCGTGCCGT ATCTGCAGGA ACTGGGCGTG CGTTACTTGC ATCTGCTGCC GTTCCTGCGC GCACGTGCCG GCGACAATGA TGGCGGCTTT GCGGTCAGCG ACTACGGCCA GGTGGAGCCC AGTCTGGGCT CCAACGACGA TTTGATCGCA CTCACCACCC GCCTGCGCGA GGCTGACATC AGCCTGTGCG CGGACTTCGT CCTCAACCAC ACCGCCGACG ATCATGCCTG GGCACAGGCG GCGCGCGCCG GCGATACGCG CTATCTGGAT TACTACCACC ACTTTGCCGA CCGCAGCCTG CCCGACCAGT ACGAAAGCGC CTTAGGTCAG GTATTTCCGC ACACTGCGCC CGGCAACTTC ACCTGGGTGG ACGACACCGC GCAATGGATG TGGACCACGT TCTATCCGTA TCAATGGGAT TTGAACTGGA GCAATCCGGC CGTGTTCGGC GACATGGCAC TGGCGATGCT GCGGCTGGCC AATCTGGGCG TGGAAGCATT CCGCCTGGAT TCCACCGCCT ACCTGTGGAA GCGCACCGGC ACCGATTGCA TGAACCAGCC CGAGGCGCAC ACCTTGCTGG TGGCGTTGCG CGCGGTCACC GATATCGTCG CGCCATCAGT AGTAATGAAG GCCGAAGCCA TCGTGCCGAT GACGCAACTG CCGCCGTACT TCGGCAGCGG CGCGGGCCAG GGCCATGAAT GCCATCTGGC CTACCACAGT ACCTTGATGG CGGCGGGCTG GTCGGCACTG GCATTGCAAC GCGGCGATAT TTTGCACAAC GTCATTGCGC ACAGCCCGCC GTTGCCGCGC AATTGCGCAT GGCTGAGCTA TGTGCGTTGC CACGACGATA TCGGCTGGAA TGTGCTGCAG CACGAAGCCG CGGGCAATGC AGCGCAACCG CCGTTTTCGC TGCGCGATGT GGCGCGTTTC TATGCCAACG CGGTGCCGGG CAGCTACGCG CGCGGCGAGA GTTTCCAGAG CAGCGGCGAC GGCGTGCACG GCACCAACGG CATGGCTGCC GCATTGGCAG GTATCCAAGC CGCGCAGGAG GCAGGCGATG CTGCAGGGTT GGCGGTTGCC GTGAATCGGC TGATGCTGCT GTATGCCATT GCGCTTGCCA TGCCAGGTGT GCCGCTGATC TACATGGGCG ACGAATTGGC GATGCTCAAT GACACCAGCT ACCGCGACGA TCCGCATCGC CAGCATGAAG GCCGTTGGTT GCATCGGCCG GCGATGGATT GGCGGCTTGC CGCGCAACGG CACGATGCAG AGAGCCTAAG CGGCACGGTG TACCGCCGTT TGCGCGGATT GATCCAGCAA CGTGCCGCGT TAGGCGCGTT GGCAGCAGAT CACGCACTGG GCAGCATTGC GCTGGATGAT CCTCGCCTGT TCGCGTTGAG CCGTGGCGAA AGCTTTCTCG CCGTGCATAA CTTCAGCGAT CAGCCGCTTG AGGTGGAGCT TGCCGCGATC GGTGATGGCT GGGAGCTGTT GGCGATCGGC GATGACGTGG ATGCCGCCGC GCCGAGCGAC AACGTCTCGC TTGTGCTTCC GGCTTACGGC GTGCGTTGGT TGCAGCGCGG TGCCTGA
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Protein sequence | MSTSPINSTI LRAAFAAPLD PQRAAIVMAR YDQHAPRLLD ALQTLYGQRA HYAPWLTQWL GELGDLARQR PQALQTLDST RHAGWFGEQH MLGYSAYADR FAGTLQGVAE RVPYLQELGV RYLHLLPFLR ARAGDNDGGF AVSDYGQVEP SLGSNDDLIA LTTRLREADI SLCADFVLNH TADDHAWAQA ARAGDTRYLD YYHHFADRSL PDQYESALGQ VFPHTAPGNF TWVDDTAQWM WTTFYPYQWD LNWSNPAVFG DMALAMLRLA NLGVEAFRLD STAYLWKRTG TDCMNQPEAH TLLVALRAVT DIVAPSVVMK AEAIVPMTQL PPYFGSGAGQ GHECHLAYHS TLMAAGWSAL ALQRGDILHN VIAHSPPLPR NCAWLSYVRC HDDIGWNVLQ HEAAGNAAQP PFSLRDVARF YANAVPGSYA RGESFQSSGD GVHGTNGMAA ALAGIQAAQE AGDAAGLAVA VNRLMLLYAI ALAMPGVPLI YMGDELAMLN DTSYRDDPHR QHEGRWLHRP AMDWRLAAQR HDAESLSGTV YRRLRGLIQQ RAALGALAAD HALGSIALDD PRLFALSRGE SFLAVHNFSD QPLEVELAAI GDGWELLAIG DDVDAAAPSD NVSLVLPAYG VRWLQRGA
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