Gene PXO_02416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_02416 
Symbol 
ID6307651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp4264570 
End bp4266486 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content64% 
IMG OID642641388 
Productalpha-amlyase 
Protein accessionYP_001915236 
Protein GI188578307 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCT CCCCGATCAA TTCCACCATA CTGCGCGCGG CCTTTGCCGC GCCGCTGGAT 
CCGCAACGCG CCGCCATTGT GATGGCGCGC TACGACCAGC ACGCACCGCG TTTGCTGGAT
GCCTTGCAGA CGTTGTACGG CCAGCGGGCC CACTATGCGC CGTGGTTGAC GCAGTGGCTG
GGAGAACTGG GCGATCTCGC CCGGCAACGC CCGCAAGCGC TGCAGACCCT CGACAGCACA
CGGCACGCCG GTTGGTTCGG CGAACAGCAC ATGCTCGGCT ACAGCGCCTA CGCAGACCGC
TTTGCCGGCA CGCTGCAGGG CGTGGCCGAA CGCGTGCCGT ATCTGCAGGA ACTGGGCGTG
CGTTACTTGC ATCTGCTGCC GTTCCTGCGC GCACGTGCCG GCGACAATGA TGGCGGCTTT
GCGGTCAGCG ACTACGGCCA GGTGGAGCCC AGTCTGGGCT CCAACGACGA TTTGATCGCA
CTCACCACCC GCCTGCGCGA GGCTGACATC AGCCTGTGCG CGGACTTCGT CCTCAACCAC
ACCGCCGACG ATCATGCCTG GGCACAGGCG GCGCGCGCCG GCGATACGCG CTATCTGGAT
TACTACCACC ACTTTGCCGA CCGCAGCCTG CCCGACCAGT ACGAAAGCGC CTTAGGTCAG
GTATTTCCGC ACACTGCGCC CGGCAACTTC ACCTGGGTGG ACGACACCGC GCAATGGATG
TGGACCACGT TCTATCCGTA TCAATGGGAT TTGAACTGGA GCAATCCGGC CGTGTTCGGC
GACATGGCAC TGGCGATGCT GCGGCTGGCC AATCTGGGCG TGGAAGCATT CCGCCTGGAT
TCCACCGCCT ACCTGTGGAA GCGCACCGGC ACCGATTGCA TGAACCAGCC CGAGGCGCAC
ACCTTGCTGG TGGCGTTGCG CGCGGTCACC GATATCGTCG CGCCATCAGT AGTAATGAAG
GCCGAAGCCA TCGTGCCGAT GACGCAACTG CCGCCGTACT TCGGCAGCGG CGCGGGCCAG
GGCCATGAAT GCCATCTGGC CTACCACAGT ACCTTGATGG CGGCGGGCTG GTCGGCACTG
GCATTGCAAC GCGGCGATAT TTTGCACAAC GTCATTGCGC ACAGCCCGCC GTTGCCGCGC
AATTGCGCAT GGCTGAGCTA TGTGCGTTGC CACGACGATA TCGGCTGGAA TGTGCTGCAG
CACGAAGCCG CGGGCAATGC AGCGCAACCG CCGTTTTCGC TGCGCGATGT GGCGCGTTTC
TATGCCAACG CGGTGCCGGG CAGCTACGCG CGCGGCGAGA GTTTCCAGAG CAGCGGCGAC
GGCGTGCACG GCACCAACGG CATGGCTGCC GCATTGGCAG GTATCCAAGC CGCGCAGGAG
GCAGGCGATG CTGCAGGGTT GGCGGTTGCC GTGAATCGGC TGATGCTGCT GTATGCCATT
GCGCTTGCCA TGCCAGGTGT GCCGCTGATC TACATGGGCG ACGAATTGGC GATGCTCAAT
GACACCAGCT ACCGCGACGA TCCGCATCGC CAGCATGAAG GCCGTTGGTT GCATCGGCCG
GCGATGGATT GGCGGCTTGC CGCGCAACGG CACGATGCAG AGAGCCTAAG CGGCACGGTG
TACCGCCGTT TGCGCGGATT GATCCAGCAA CGTGCCGCGT TAGGCGCGTT GGCAGCAGAT
CACGCACTGG GCAGCATTGC GCTGGATGAT CCTCGCCTGT TCGCGTTGAG CCGTGGCGAA
AGCTTTCTCG CCGTGCATAA CTTCAGCGAT CAGCCGCTTG AGGTGGAGCT TGCCGCGATC
GGTGATGGCT GGGAGCTGTT GGCGATCGGC GATGACGTGG ATGCCGCCGC GCCGAGCGAC
AACGTCTCGC TTGTGCTTCC GGCTTACGGC GTGCGTTGGT TGCAGCGCGG TGCCTGA
 
Protein sequence
MSTSPINSTI LRAAFAAPLD PQRAAIVMAR YDQHAPRLLD ALQTLYGQRA HYAPWLTQWL 
GELGDLARQR PQALQTLDST RHAGWFGEQH MLGYSAYADR FAGTLQGVAE RVPYLQELGV
RYLHLLPFLR ARAGDNDGGF AVSDYGQVEP SLGSNDDLIA LTTRLREADI SLCADFVLNH
TADDHAWAQA ARAGDTRYLD YYHHFADRSL PDQYESALGQ VFPHTAPGNF TWVDDTAQWM
WTTFYPYQWD LNWSNPAVFG DMALAMLRLA NLGVEAFRLD STAYLWKRTG TDCMNQPEAH
TLLVALRAVT DIVAPSVVMK AEAIVPMTQL PPYFGSGAGQ GHECHLAYHS TLMAAGWSAL
ALQRGDILHN VIAHSPPLPR NCAWLSYVRC HDDIGWNVLQ HEAAGNAAQP PFSLRDVARF
YANAVPGSYA RGESFQSSGD GVHGTNGMAA ALAGIQAAQE AGDAAGLAVA VNRLMLLYAI
ALAMPGVPLI YMGDELAMLN DTSYRDDPHR QHEGRWLHRP AMDWRLAAQR HDAESLSGTV
YRRLRGLIQQ RAALGALAAD HALGSIALDD PRLFALSRGE SFLAVHNFSD QPLEVELAAI
GDGWELLAIG DDVDAAAPSD NVSLVLPAYG VRWLQRGA