| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02129 |
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| Symbol | |
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| ID | 6307188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3769598 |
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| End bp | 3771601 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642640934 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001914782 |
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| Protein GI | 188577853 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.220582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGTATG CGCCGTCGTT GGCGCTGGTG TGGGGGCCGG CATGCCATGT GCAGGCACAG
GATGCGGCAC TGACGCTGGG CAAGGTGCAG GTGCGCGAAC ACGCGCAGCG CAGTCCGAGT
ACGGCGCGCG TGTTGAGCTC GGTGGATGTG ATCGGCGGCG AGCTGCTGCA CGATCAACAC
GTGGACTACA GCTGGGAACT GCTGATGCGT GCGCCCGGGG TGCAGGTCAC CCAGTTCCGC
ATGGGCACGG ATGCAGGGCG GTTTTCGTTC CGCGGCTTCA ATGGCGAGGG GCGCATCAAT
GCGGTGAAAC TGCTGATCGA CGGCATTCCC AGCAACGACA ATGCCGGCGC CATGCCGTAC
CTGGATGCCG TGTTTCCGCA GGACATCAGC GCGATCGAGA TCGTGCGCGG CACCAACGAC
GCGCGCTATG GCTTGAACGC CATTGCCGGC AGCGTGGACG TGCTGACCCG TACCGGCGGC
AACGATGGCC GCTTGAGCGT GACGGCCGGC AGCTTCGATG CGCGCGAGGT GCAACTCAGC
AAAGGTTTCG AGCAGGGCGC ATGGAGCCAG AACTATATGC TGGCCTGGCG CGACTCGGAC
GGCTATCGCG ATCATGCCGA TGCGCGTAAA CGCAGCGTAG CGGGCAAATG GTTTTACACC
GACCCGGACG GTGCATTCCG CGCCGGACTC ACCACGCGCT ATTACGACAA CCATGCACTG
GAAGCCGGCT ATCTGGACGC CGCCACCGCG CGTGCGGCGC CGCGTAGCTC GCCGGACTAT
GCGCAGAACG ACCGCAGCCA GCGCCGCCTG CGTCAGACCG CGTTGCATGC GGACGGCGAG
CTCGGTGAGC AGGCGCAATG GAGCGCCAAG GCCTACCAGA ACGACTACCG CAATCAGCGC
TGGGTGCGGT TTTCTGCTGC CGGCCTGCAG CAGGAACGCG ATACCGATGA GACCCATCGC
GGGCTGTTGC TGCGTAGCAA CTGGCAGCCG GACTGGGGCG CGCTCAATGC CAATCTCGAA
GCCGGCGTGG ATGCGCAGTG GCAGGAAAAT CAGTCGCAGC GGTACCGCAC CGTGGCCCGC
GTACGCGGTG CGCAGTTGCG CGATTGGGAT TACGACCTGC GCACACGTGG TGCGTATGTC
CAGGCGGTGC TGACGCCGTT TGCGCGCTTG CAGCTGGTGC CGGGGTATCG CATCGACCGC
GTCGATGGGC AGTTGCACGA TGTGCTGGCC GGCAGCGTTG CGCCGACCTA TGACTACGGC
ACCATCAAGC AACCCAAGTT CAGCGCGAGC TACCGCGTGG GCGGGCAGAG CAGCGTGTAT
GCGAACTGGG GGCGCACGTT CCAGATCGGC AGCGGCGATG GTGCCTACCG TCGCCAGTCC
GGCGATCTGG GGCCATCGAT CAACGACGGT TGGGAGACCG GCTTCAAGTT CGCACCGTCG
ACCCTGGTGG ATGGGCGCCT GGCGTATTGG GAGCAACGCG CATCCGGTGA AGTGGCGACC
GTTCTTGGCG TGAATGGCGT GGTGGGCATT GGCGCTGTGG CCAATGTCGG CCGCACGTTG
CGGCGCGGTT GGGATGCGCA GCTCAACCTG CAGCCGGCTG AGCACTGGCG CGCATGGGTA
TCGTATTCGC GGCAGAAGGC CATGATCGCC ACCCCCGATC CGAGCGCATC GGCCACGCGC
GGCAAGGAGA TCGAAAACGT GCCGCACTGG CTGGCGACCG CCGGGCTGGA GTGGCAGCTC
AGTTCGGCGG TGCAGTTGAG CGCCTGGGGC AACGCGCAAG GTGATTACTA TCTGGAGCGC
ACCAATACGC TGGGCCGTGC CGGTGGCGAT GCCTTGCTCA ATCTGGGCGC GCGCTGGAAT
GTGGATGCGC GCAACGCGCT CAGCCTGCAG CTGCGCAATG TCACCGATCG TGCGTATGTG
TACGCCTGGT ACGACAGCGG CACCTCCGGC TATTCGCCCG GCGATGGGCG TGCGTTGTCG
CTGTCGTGGG ATTGGAGCTT CTGA
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| Protein sequence | MWYAPSLALV WGPACHVQAQ DAALTLGKVQ VREHAQRSPS TARVLSSVDV IGGELLHDQH
VDYSWELLMR APGVQVTQFR MGTDAGRFSF RGFNGEGRIN AVKLLIDGIP SNDNAGAMPY
LDAVFPQDIS AIEIVRGTND ARYGLNAIAG SVDVLTRTGG NDGRLSVTAG SFDAREVQLS
KGFEQGAWSQ NYMLAWRDSD GYRDHADARK RSVAGKWFYT DPDGAFRAGL TTRYYDNHAL
EAGYLDAATA RAAPRSSPDY AQNDRSQRRL RQTALHADGE LGEQAQWSAK AYQNDYRNQR
WVRFSAAGLQ QERDTDETHR GLLLRSNWQP DWGALNANLE AGVDAQWQEN QSQRYRTVAR
VRGAQLRDWD YDLRTRGAYV QAVLTPFARL QLVPGYRIDR VDGQLHDVLA GSVAPTYDYG
TIKQPKFSAS YRVGGQSSVY ANWGRTFQIG SGDGAYRRQS GDLGPSINDG WETGFKFAPS
TLVDGRLAYW EQRASGEVAT VLGVNGVVGI GAVANVGRTL RRGWDAQLNL QPAEHWRAWV
SYSRQKAMIA TPDPSASATR GKEIENVPHW LATAGLEWQL SSAVQLSAWG NAQGDYYLER
TNTLGRAGGD ALLNLGARWN VDARNALSLQ LRNVTDRAYV YAWYDSGTSG YSPGDGRALS
LSWDWSF
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