| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01818 |
|---|
| Symbol | |
|---|
| ID | 6306500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 3069076 |
|---|
| End bp | 3069813 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642640254 |
|---|
| Product | ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001914111 |
|---|
| Protein GI | 188577182 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000012979 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAGG ACGCGACGCT TCAGGCGCGC AAGCTCACCG TTCGCCGGGG TGGCAAAGAC
ACGCTCGTCG CGCTGGACTT GCGCATTCCC GCGGGCCGCG TGTATGCGCT CCTCGGCGGC
AACGGTGCAG GGAAGACCAC GACGCTGAAC GCCTTTCTGG GCTTTGTTAC GGCATCGCAG
GGCTGCGCTC TGGTGGACGG GATCGATGCG TCGCAGCACC CCGAAGCGGC GCGTGCGCGC
CTGGCGTACT TGCCCGAAAA CGTCGCGTTG TATCCCTATC TGTCAGGCGT GGAGAACCTG
CGGTATTTCT GCGCGCTGTC GGAAATCGCG CTGACCAAGC CGCAGGCCAG GGCCCTGCTC
GACGGCAGCG GCCTGGCCGG CGACGCGCAC GACCGCCGGG TGGCGGTTTA CTCCAAGGGC
ATGCGGCAAA AGGTCGGCCT GGCCATTGCC CGGGCCCGCA GGGCCACGGC GATGCTCCTC
GACGAGCCGA CCTCGGGCCT TGACCCGTCG GCATCCAACG AGTTCGCACA AGGCATCCTT
GCAGCCAAGG CAGGGGGCAT GGCCATTTTG ATGGCGACGC ACGATCTCTT CAACGCGCTC
CAGGTCGCCG ACCATATCGG CATCCTGTGC GAGGGTCGGT TGGTCGCAGA GTTCGAAACC
GCAGATGTCG CCCACGCCGA ACTCGAGCGC ATCTACCTGG CGCATGCGCG GGGCACGCCG
GAAGCGATGG CGCGATGA
|
|---|
| Protein sequence | MGEDATLQAR KLTVRRGGKD TLVALDLRIP AGRVYALLGG NGAGKTTTLN AFLGFVTASQ
GCALVDGIDA SQHPEAARAR LAYLPENVAL YPYLSGVENL RYFCALSEIA LTKPQARALL
DGSGLAGDAH DRRVAVYSKG MRQKVGLAIA RARRATAMLL DEPTSGLDPS ASNEFAQGIL
AAKAGGMAIL MATHDLFNAL QVADHIGILC EGRLVAEFET ADVAHAELER IYLAHARGTP
EAMAR
|
|---|
| |