| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01648 |
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| Symbol | nudE |
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| ID | 6306668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3242661 |
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| End bp | 3243209 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642640421 |
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| Product | ADP-ribose diphosphatase NudE |
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| Protein accession | YP_001914278 |
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| Protein GI | 188577349 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1051] ADP-ribose pyrophosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.541498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTTGC GCCTGCCGAC CATCCACAAA ATCACCGATC TGGGCGACGG GCCGTTCCGT
CGGCAGCGGC TGGATCTGGA ATTTTCCAAC GGGCAGCGCC GCATCTACGA ACGTCAACTC
AGCCAAGGCC ACGGGGCCGT GGTGGTGGTG CCGATGCTCG ATGCGCAGAC CGTGCTGCTG
GTGCGCGAAT ACGCCGCCGG CGTGCATCGC TACGAGCTGG GTCTGGTCAA GGGCCGCATC
GATGCGGGCG AAACGCCCGA GCAGGCCGCC GACCGCGAGC TCAAGGAAGA AGCCGGCTAC
GGCGCACGCC AGGTCCAGGT GCTGCGCGCG ATGACGCTCG CTCCCACTTA TATGAGTCAC
CAATCCTGGT TGGTACTGGC ACGCGACCTC TACCCCGAGC GCCTGGTCGG CGACGAGCCG
GAAGAGATGG ACGTGGTGCC GTGGCCGATC GCACGCCTGG ACGAATTGAT GCTGCGCGAA
GATTTCTCCG AAGGCCGCTC GCTGGCCGCC TTGTTCATTG CGCGCGAGTG GCTGGAGCGC
AACCCATGA
|
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| Protein sequence | MSLRLPTIHK ITDLGDGPFR RQRLDLEFSN GQRRIYERQL SQGHGAVVVV PMLDAQTVLL
VREYAAGVHR YELGLVKGRI DAGETPEQAA DRELKEEAGY GARQVQVLRA MTLAPTYMSH
QSWLVLARDL YPERLVGDEP EEMDVVPWPI ARLDELMLRE DFSEGRSLAA LFIAREWLER
NP
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