Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01638 |
Symbol | |
ID | 6306677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3258826 |
End bp | 3261495 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642640430 |
Product | glucan 1,4-beta-glucosidase |
Protein accession | YP_001914287 |
Protein GI | 188577358 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTTGT CCGTCTTTCC GTGCCGTCTT GCCGCCGCAC TGAGTGTGGG TCTGGCTCTG CCGCTCATCG CTGCACCGGC AGTGTCCGCA AAAAACACCG ATGCAACGCC CGAACAACGT GCCGCCGACC TGGTGGCGCA CATGAGCCGC GAAGAAAAAG TGGCGCAGGC CATGAACGAT GCGCCTGCAA TTCCGCGCTT GGGCATCCCC GCCTATGAGT GGTGGAGCGA GGGCCTGCAC GGCATCGCCC GCAACGGTTA TGCCACGGTG TTTCCACAAG CCATTGGCCT GGCGGCGAGC TGGAATACCC ATCTCATGCA GCAAGTGGGC ACGGTGGTCT CTACCGAAGC GCGCGCCAAG TTCAACCAGG CCGGTCGCCC GGGCAAGGAC CACAAGCGCT ACGCCGGTCT CACCATCTGG TCGCCCAACA TCAATATCTT CCGCGACCCG CGCTGGGGCC GTGGCATGGA AACGTACGGC GAAGACCCGT TCCTCACCGG ACAGATGGCA GTGGGCTTTA TCCACGGCCT GCAGGGCGAT GACCTCGACC ACCCGCGCAC GATCGCCACG CCCAAGCACC TCGCCGTGCA CAGCGGGCCC GAGCCGGGCC GGCATGGATT CGATGTCGAT GTGTCGCCAC GCGATGTGGA AGCGACCTAT ACGCCGGCCT TCCGCGCTGC CATCGTCGAA GGACAGGCCG GCGCGGTGAT GTGTGCGTAC AACTCGCTGC ACGGCACGCC GGCGTGCGCC GCCGACTGGT TGATCAACGG CCGCGTACGT GGCGACTGGG GCTTCAAGGG GTTTGTGGTG TCCGACTGCG ATGCGGTGGA CGACATGACC CAGTTCCATT ATTTCCGCCC GGATAATGCC GGCTCCTCGG CCGCAGCGCT CAAGGCCGGG CATGATCTCA ATTGTGGGCA TGCCTATCGC GAACTCGGCA CGGCGATCGC GCGCGGCGAA GTGGACGAAG CCTTGCTCGA CCAATCGCTG GTGCGCCTGT TTGCCGCCCG CTATCGCCTG GGCGAGCTGG AGGCCCCGCG CAAGGATCCT TACGCACGGC TGGGCGCGAA GGATGTCGAC AACGCGCAGC ATCGTGCGCT GGCCTTGCAG GCGGCGGCCG AGTCGATCGT GTTGCTGAAG AACAATGCAA ACACGCTGCC TCTCAACGCC GGCACGCGGC TGGCGGTGAT CGGCCCGAAC GCCGACGCCC TGGCCGCGCT GGAAGCCAAT TACCAGGGCA CATCCTCCGC GCCGGTAACG CCGCTGCTGG GCCTGCGCCA ACGCTTCGGT GCGCAACAGG TGAGTTATGC GCAAGGTGCG CCGTTGGCCG CTGGCGTGCC GGGCATGATT CCGGAGACTG CACTGCGCAG CGATGGCAAG CCGGGGCTGC GTGGCGAATA TTTCGACAAC CTCGACATGA GCGGTGCTGC GCGCGTGGTG CGTCAGGACC GCGCGGTGAG CTTCAACTGG GATCAGGTTG CCCCGGCGAA GGGCGTCCCT GCCGACCGTT ATGCGGTGCG CTGGAGCGGC GAATTGCTGC CGCCCAGCGC TGGCGATTAC ACCCTGGCGG TGCGCGTGGC GCGTTGCTTC GATTGCACCG GGCACGACCC GGTGCGCCTA TATATCGACG ACAAGCTGGT GGTTGCCGGC AATGCCGAAG ACAAGCACGT GCCGGCCGGC ATGCATAACG CCGATGGCCG CAGCGTGGAA ACTGTGCTGC ATTTTAACGA TACCCGCCCG CGCAAGATTC GCCTGGAAAT GGAGCACCGC GGCCAGGACC AGGGCGTGCG TCTGGAATGG CTGGCCCCTG CCGCGGCGCA ACTGGCCGAG GCCGAGCAGG CCGTGGCGCA GGCAGACGCC GTGGTGGCCT TCGTCGGCCT GTCGCCGGAT GTGGAAGGCG AAGAGTTGCG GATCGATGTG CCCGGCTTCG ACGGCGGCGA CCGCAACGAC ATCGCCCTGC CCGCCCCGCA GCAAGCGCTG CTCGAACGGG CAAAAGCCTC GGGCAAACCG CTGGTGGTGG TGCTGATGAG CGGCAGCGCG GTGGCCTTGA ACTGGGCCAA GACGCACGCC GATGCGATCG TGGCCGCGTG GTATCCCGGC CAGTCTGGCG GCACCGCGAT CGCGCGCATG CTGGCCGGCG ATGACAACCC CGGCGGTCGG CTGCCGGTGA CGTTCTATCG CTCCACCAAG GACCTGCCGG CGTACGTCAG TTACGACATG AAGGGCCGCA CCTACCGCTA CTTCAAGGGT GAGCCGCTGT TTCCGTTCGG CTATGGCCTG AGCTACACCC GCTTTGCCTA TGACGCGCCG CAGCTGTCCA GCACCGCGGT GCAGGCCGGC AGCACGTTGC AGGTGACCAC CACCGTGCGC AACACCGGCG CACGTGCCGG CGACGAAGTG GCGCAGGTGT ATCTGCAATA TCCGGACCGC CCGCAGTCGC CGTTGCGCAG TCTGGTCGGT TTTCAGCGCG TGCATCTTGC AGCGGGCGAG CAACGCACGC TGACCTTCAA TCTGGATGCA CGCGCGTTGA GCGATGTGGA TCGCAGCGGG CAGCGCGCGG TGGAAGCCGG CAACTACACG TTGTTTGTCG GCGGTGGGCA GCCGGATACT GGCGCCGCTG GCAATGCTGC GTCGTTTTCG ATCCAGGGAC GCTCGCCGTT GCCGAAGTAA
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Protein sequence | MSLSVFPCRL AAALSVGLAL PLIAAPAVSA KNTDATPEQR AADLVAHMSR EEKVAQAMND APAIPRLGIP AYEWWSEGLH GIARNGYATV FPQAIGLAAS WNTHLMQQVG TVVSTEARAK FNQAGRPGKD HKRYAGLTIW SPNINIFRDP RWGRGMETYG EDPFLTGQMA VGFIHGLQGD DLDHPRTIAT PKHLAVHSGP EPGRHGFDVD VSPRDVEATY TPAFRAAIVE GQAGAVMCAY NSLHGTPACA ADWLINGRVR GDWGFKGFVV SDCDAVDDMT QFHYFRPDNA GSSAAALKAG HDLNCGHAYR ELGTAIARGE VDEALLDQSL VRLFAARYRL GELEAPRKDP YARLGAKDVD NAQHRALALQ AAAESIVLLK NNANTLPLNA GTRLAVIGPN ADALAALEAN YQGTSSAPVT PLLGLRQRFG AQQVSYAQGA PLAAGVPGMI PETALRSDGK PGLRGEYFDN LDMSGAARVV RQDRAVSFNW DQVAPAKGVP ADRYAVRWSG ELLPPSAGDY TLAVRVARCF DCTGHDPVRL YIDDKLVVAG NAEDKHVPAG MHNADGRSVE TVLHFNDTRP RKIRLEMEHR GQDQGVRLEW LAPAAAQLAE AEQAVAQADA VVAFVGLSPD VEGEELRIDV PGFDGGDRND IALPAPQQAL LERAKASGKP LVVVLMSGSA VALNWAKTHA DAIVAAWYPG QSGGTAIARM LAGDDNPGGR LPVTFYRSTK DLPAYVSYDM KGRTYRYFKG EPLFPFGYGL SYTRFAYDAP QLSSTAVQAG STLQVTTTVR NTGARAGDEV AQVYLQYPDR PQSPLRSLVG FQRVHLAAGE QRTLTFNLDA RALSDVDRSG QRAVEAGNYT LFVGGGQPDT GAAGNAASFS IQGRSPLPK
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