Gene PXO_01620 details

Gene Information

• Locus tag: PXO_01620
• ID: 6306693
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 3283191
• End bp: 3285161
• Gene Length: 1971 bp
• Protein Length: 656 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642640446
• Product: leucin rich protein
• Protein accession: YP_001914303
• Protein GI: 188577374
• COG category: [S] Function unknown
• COG ID: [COG4886] Leucine-rich repeat (LRR) protein

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGAAGG CGATGCGACG CGTCGATCAA CCACGCCTAC CGGGCACGCC TGTCGGCCTG 
CGGGAGCAGA GTACGTCCAA TGCAGATGCG CCCGCGCGCA ACGAGCCAGC CGCGCAGCCC 
GCGCCTGAGC GCCCTGCGGG CATGCTCAGG GGCCTGGCCA GCTATCTGCC TGGTTACCGG 
TCTGGTCGCC CGCCAGCAAC GCCGGCCTCT GCCCAGACCT CCAGCCGACC AACCACATCC 
GCTCGCCCTG TTCGCCACGG CGAATCCAGC AGTTCCGTGC GGATGAACGA GGCGCCTGCA 
GATCCTTCGC AAACACCGCA ATTGCCACAA CTCAGCAACA TCGAACGCGC TCGCTTTCAC 
GCCGTGGCCA CAGATTCACA CCACTTGGGC CCAACGCGCC CCACTGTGCC ACCGACCGTG 
GGCGCTTCAT TACAGAGCTC CACACCGATT CGCCCGTACC GCGACGTCTT GTCGCAATGG 
CAACAACACT ACGACGCAGA TCGCAACGGC TGGCACAGCG CATGGCGCCA GGCCAACAGC 
GACACCTCGG TGGTCGAGAC GAGCACAGGC CAGGCACTGA AAGCAACAGC GGACATGCTG 
GAAAACGCAA CCCTGGCGGA ACGTGTATCG CTGGAACTGC GCTCAGTTCC GCTTCCGCAC 
TTTCCCGAGC AGACATTCCG CCTTTCTCAT CTGCAGCACA TCACGATCGA CGCTGCGGGG 
TTGATGAAGC TTCCGGCCGA CATGCAGAAA TTCGCTGCTC TGGAAACGCT GACGCTTGCA 
CGCAATCCGC TTCGGTCGCT CCCTGCATCC ATCTCAAGCC TTCGCCGATT ACGCGAGCTC 
TCCATCCTCG CCTGCCCGAC CTTGAAGGAA CTTCCCGAAA GCCTGGCCGG CACCAATGCA 
TCCGGCGAGC ACGAGGGGTT GGTCAACCTA CAGAGGCTGC AGTTGGAAGA GACCGGGATC 
ACATCGCTTC CGGCGTCCAT CGCCACCCTG CAAAACCTGA AAAGGCTACA GGTACGCCAC 
TCGCCGCTGC TTGCCGTCGC ACCGGCCATC CATCAAATGC CAAAGCTCGA AGAACTTGAT 
TTTCAAGGCT GCACAGCGCT GCGCAACTAT CCGCCGATTT TTGGCGGCAG CGCGCCATTG 
AAGCGACTGA ATCTAAAAGA CTGCAGCAAC CTGCGCACGC TGCCGCTGGA CATTCACAAC 
CTGACGCAAC TTGAAGAACT CGATCTGCGA GGCTGCAACA ATCTCTCCAG GCTGCCCTCG 
TCGATCGGCA GATTACCTGC CAATTGCGTC ATCCTGGTTC CGCCGCATTT ACAAGTACAA 
CTTGACCGAC GGCGCCTGAG TGCGCGCCCA GCCGAACCAC AACGGACTGA CCCGTCCATC 
CCTGGCCCCT CAGGCCATGG CAGCAGCGCA TCCTCGGTGA CCACAACCGA ACTCCTGCAT 
AAGGCTGCGC TCGAACGCAT CGAAGACGCC GCTCATGCCA TGCTTAGCGC TGTCATTGAT 
CAGGAAAGAA ATCCCTTTCT GGAAGGTGCA CCGCCCTATC TTCCAGAAAA GCGCCCGCCC 
GGCGCTACCA CCTTCGGCCA GATTCCGGTA TTGAAGAAAA TGCTGAGGGA AAGCAGGGAT 
CGCCATTTCC TGAAACGGGT GAGCGAAATG GCAGGCCCAT GCCCCAGAGT CGAAGACCAG 
ACTGAGGAAG GCCTCAGCCG CCATTACATG AACGTCAGCA ATTGGAAGGC GCAGAAGAGC 
GCGCACCTGG GCATCGTCGA TCATCTTGGA CAGTTCGTTT ATCGCGAAGG AAGCCAGCTC 
GACGCAGCGA CGCTGGCCAA GGCAGTCCAG ATGTGGAAGA CCCGCGAGTT GATTGTCGAT 
GCGCACCCGG AAGACCGGGC ACGCTTTCCT TCCTTCACCA TACACATTCC CGACCAGGCG 
AGCGATGACT CCGATAGCGA GCAGCAAACA ACCTCGGAAC CTTCGCGCTA G 

 

Protein sequence

MRKAMRRVDQ PRLPGTPVGL REQSTSNADA PARNEPAAQP APERPAGMLR GLASYLPGYR 
SGRPPATPAS AQTSSRPTTS ARPVRHGESS SSVRMNEAPA DPSQTPQLPQ LSNIERARFH 
AVATDSHHLG PTRPTVPPTV GASLQSSTPI RPYRDVLSQW QQHYDADRNG WHSAWRQANS 
DTSVVETSTG QALKATADML ENATLAERVS LELRSVPLPH FPEQTFRLSH LQHITIDAAG 
LMKLPADMQK FAALETLTLA RNPLRSLPAS ISSLRRLREL SILACPTLKE LPESLAGTNA 
SGEHEGLVNL QRLQLEETGI TSLPASIATL QNLKRLQVRH SPLLAVAPAI HQMPKLEELD 
FQGCTALRNY PPIFGGSAPL KRLNLKDCSN LRTLPLDIHN LTQLEELDLR GCNNLSRLPS 
SIGRLPANCV ILVPPHLQVQ LDRRRLSARP AEPQRTDPSI PGPSGHGSSA SSVTTTELLH 
KAALERIEDA AHAMLSAVID QERNPFLEGA PPYLPEKRPP GATTFGQIPV LKKMLRESRD 
RHFLKRVSEM AGPCPRVEDQ TEEGLSRHYM NVSNWKAQKS AHLGIVDHLG QFVYREGSQL 
DAATLAKAVQ MWKTRELIVD AHPEDRARFP SFTIHIPDQA SDDSDSEQQT TSEPSR