| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01531 |
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| Symbol | |
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| ID | 6306785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 3383245 |
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| End bp | 3385923 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642640535 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001914391 |
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| Protein GI | 188577462 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCGA TCACGCCCAA GCAATGGATC GGCGCGCCGC AGGCCAAGGG CGATACGGTG
CCGCTGTCCA GCGCCGACGC CTTGAAGGCA GTGCTGGAAT ATCGCGGGTT CGCCGGCGAG
GTCAGTGAGC CGGCGCAACT GCCGCACGAT CGCAAGCCGG CGGCGATCAG CACGCCCAGC
GGCAGCTACA AGGCCGATGT GTTGCACGCC AACAGCACGC GCTACCCCTG GGCGCTGCGC
ACCCATAGCA TGAGCGGCGC TTCGGCCGAG CAGGCGCTGC AGCAACGGTA TGCGCGCATG
TGTGCGGCCA GCCACAACGG CAAACAGGGC GATCAGCGAC AGACCTACAT GCCGATGCTG
CTGGGCCTGT GGGACGCGGT GGGCGTGGTG CACAAGCTCA ACGGCTACCG GCACGACGTG
GTCGCGGCAA TGGCGCGTTA CAAGGACGAG CGGGCGCTGG AATTCAACGC GATGGAAGGC
ATCGCCTATT GGTTCGAGCA CACCGGCGCG GCCGACAGCG CCACGCGCGG CACGCACACG
CTGGTGCTGT CGGACCACAA CGCCGCCTTC GCCGACCTGG GCACGGTGCG CTACCACCGC
ACCGACGTCA CCGAGCAGCA GGACAGCGTG CAGCAGTGGG TACAGGCACA TCGCTGGCGC
GCGACCAGTC TGTCGCGGGC CAGCTGGGAC TACCGCAGCC GCAGCCTGCG CCCGGCCGGC
GCCGAAGGCA CGCCGCTGGG CGACATCGGT GCCGAGGACG TGGACACCGC CGGGCCGTAC
GGCTGGCAGG ACAGCATGCG CGGCCAGCGC CGCGCGCAGC AGCAGTTCGA TGCGCAGCAG
GTGGCGGCGC AGACCATCCA GGGCCAGGGG ACCTGGCGCC AGCTGGCGCC GGGCACGCGT
TTCGGGCTGA GCCAGCATGC GGTCGTGGCG GCCGATGCGC AGTTCCTGTG CCTGCAGGTG
CGGCACCAGG CGCGCAACAA TCTGGGCGCG GAGGTGTTCG ACGCGCTGGA GCAGGCGCTG
GGCGCGGTGG CGGTGGCCGG CGCGCCGCTG CCGCCAGCGC TGGCAGGCCT GAGCGGCGGG
TATGCGCCGG CGCAGGATGA GGCGGCGGTA GAGTTCTACC GCAACCAGTT CACCGCCATA
CCGGCCACCG CGACCTACCG GCCGCAGACC GAGGACGGCC ACGGCGTGCG CCTGCATCCC
AAGCCCACGG TCGTCGGCAC GCTGAGCGCG ATCGTGGTCA GCGACGGCGA CCCGGTGCAG
TCCGACCGCG ACCACCGGAT CAAGGTGCAG TTCCCGTTCC AGCGCGGGGC CGACGCCAGC
AGCGCGCTGG CGCATCCGGG GGGCGAGGAC AATGCGCCGG GCAGCGCCTC GGCGTGGACC
TGGGTGCGGG TGATGACGCC GTGGGCCGGG GACAACTGGG GCGGCGTGGT GCTGCCGCGC
AAGGGCCAGG AAGTGCTGGT GGGGTTCCTG GAAGGGGACA TCGACCGGCC GGTGGTGATC
GGCAGCGTGT ACAACGGGCG CGGCCAGGAC GACGCGGCGC ACAACCAGGT CGGCGGCGGC
GGGGCCGGGG CCACCGGCAA TGCGCCGGCG TGGTTCCAGG GCAACGCGCA CGGTGCGGTG
TTCACCGGGT TCAAGAGCCA GGCGCTGGCG CAGAGCCAGG ACGGCACCGG CGGCTACCAG
CAGCTGCGGC TGGACGACAC GCCCGGCCAG GGCCGCGCGC AGCTGTCGAC CACCCAGCAC
GCCAGCAGCT TGACCCTGGG CCACCTGAAG GGCGGCCACG ACAACCTGCG CGAAGGCGAG
CGCGGGTACG GGGCGGACCT GTCCACGCAG GCCTACGGCG CGGTGCGCGC CGGCCAGGGC
CTGCTGCTGA GCAGCGAGCC GGGCAACACC CAACTGGCCG CCACCGGCGC GCTGAGCCAA
CTGCAGCAGG GCAGCGACCT GCTCAAGCGC CTCAACGACG CCGCCCGCAC CCAGCAGGCG
GGCCTACCGA GCGAACCGGA GTCCCTGCCG ACCCAGGACG GCCTGAAGAC CTTGCAGGAC
CACCTGCAGG CCACCCACAG CGGCAGCGCG GCCGGCGCGA TCGGCGGTGG CGCCGGCGAG
GTGCCAGGCT GGAGCGCACC GGTGCTGCTG GGCAGCGGCC AGGCCGGCGT GATGAGCCTG
ACCCCCGCCG ACCAGGTGTG GGTGTCGGGC ACCCAGACCG CGCTGCTGGC CGGCAGCGCA
CTGAACTGGC TGAGCCAGGG CCACCTGGTG CTGGCGGTGG CCGGCGGGCT GGTGCTGTAC
ACCCAGGGCA GCAAGGCCGC CGCCGGCAGC CCGAATCAGG AAACCGGCAT CGCCCTGCAC
GCCGCGCAAG GCACGCTCAG CGCCCGCGCG CACAGGAACA CCGCCACCCT GGCCGCCAAG
ACCCAGGTGC GCATCGTCAG CACCACCGCC GACGTCCAGC TCGCCGCCCC GACCAAGCAC
CTGCTGGCCA CCGCGGCCGG CGCCTACATC AAACTGGACG GCGACGACAT CGAACTGGGC
GCGCCGGGGG TGGTCGCGTT CAAGGGCGGG CAGCAGGTGT TGACGGCGCC GCAGGGGGCA
TCCATGAGCC CCGTGACGCC ATCCGCCAGC CACAAGCTGT GTGAATACAC CGCCCGCGCG
GCAGATTTCG CCGGTGCAGG GACGATGGGG GCCGCCTGA
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| Protein sequence | MQAITPKQWI GAPQAKGDTV PLSSADALKA VLEYRGFAGE VSEPAQLPHD RKPAAISTPS
GSYKADVLHA NSTRYPWALR THSMSGASAE QALQQRYARM CAASHNGKQG DQRQTYMPML
LGLWDAVGVV HKLNGYRHDV VAAMARYKDE RALEFNAMEG IAYWFEHTGA ADSATRGTHT
LVLSDHNAAF ADLGTVRYHR TDVTEQQDSV QQWVQAHRWR ATSLSRASWD YRSRSLRPAG
AEGTPLGDIG AEDVDTAGPY GWQDSMRGQR RAQQQFDAQQ VAAQTIQGQG TWRQLAPGTR
FGLSQHAVVA ADAQFLCLQV RHQARNNLGA EVFDALEQAL GAVAVAGAPL PPALAGLSGG
YAPAQDEAAV EFYRNQFTAI PATATYRPQT EDGHGVRLHP KPTVVGTLSA IVVSDGDPVQ
SDRDHRIKVQ FPFQRGADAS SALAHPGGED NAPGSASAWT WVRVMTPWAG DNWGGVVLPR
KGQEVLVGFL EGDIDRPVVI GSVYNGRGQD DAAHNQVGGG GAGATGNAPA WFQGNAHGAV
FTGFKSQALA QSQDGTGGYQ QLRLDDTPGQ GRAQLSTTQH ASSLTLGHLK GGHDNLREGE
RGYGADLSTQ AYGAVRAGQG LLLSSEPGNT QLAATGALSQ LQQGSDLLKR LNDAARTQQA
GLPSEPESLP TQDGLKTLQD HLQATHSGSA AGAIGGGAGE VPGWSAPVLL GSGQAGVMSL
TPADQVWVSG TQTALLAGSA LNWLSQGHLV LAVAGGLVLY TQGSKAAAGS PNQETGIALH
AAQGTLSARA HRNTATLAAK TQVRIVSTTA DVQLAAPTKH LLATAAGAYI KLDGDDIELG
APGVVAFKGG QQVLTAPQGA SMSPVTPSAS HKLCEYTARA ADFAGAGTMG AA
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