| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01396 |
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| Symbol | gumF |
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| ID | 6306914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3508402 |
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| End bp | 3509493 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642640661 |
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| Product | exopolysaccharide xanthan biosynthesis acetyltransferase GumF |
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| Protein accession | YP_001914515 |
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| Protein GI | 188577586 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3594] Fucose 4-O-acetylase and related acetyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0850077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTGT CGGCAACGCC GGCATCCCCG TCGTCTTTGC CGGCCGCCGG GTCGCAGGTT
GCATCCACTG GTCGCGCCCG CGATCCGCGC ATCGATGCCA CCAAGGCCAT TGCGATCCTG
TTGGTGGTGT TCTGCCATGC CAAGGGCGTC CCACATGGCA TGACTTTGTT TGCCTATAGC
TTCCACGTGC CGCTGTTTTT CCTGGTGTCG GGTTGGTTGG CAGCGGGCTA TGCCTCGCGC
GATACCGGCC TGACGCAGAC GATCGCCAAG CAGGCACGTA GCTTGCTGCT GCCATACGTC
ACCTTTTATC TCCTGGGCTA CGCATACTGG TTGCTGACCC GTAATGTCGG TGAGAAGGCT
GCGCGCTGGG GAAGTCACCC CTGGTGGGAG CCGATGGTGG CGATGTTTAC CGGTATTGGT
CCGGACCTGT ATGTGCAGCC ACCGCTGTGG TTTTTGCCCG TTATGTTGGT GACCTTGGTG
AGCTACATGG TCTTGCGCCG CCGGATGTCG CCGATATTGA TCGCAGTGCT GGCATTGATC
GTGGCGTGGT TGTGGATGAA CTGGTTCCCA GTCCAGCACG TGCGGATTTT TTTCGGCCTG
GACGTGCTAC CGGTGTCGCT GTGTTTCTAC GCATTGGGCG CCTTGCTGAT CTACGTGTCG
CCACGCCTGC CGACATCCTT GGCTGGCAGC GCCCTGGCGA CGGTCGTGTT GGCATTAGCG
GTAGCCTGGC TGGCCGAAGC AAACGGGCGA ATCGACGTCA ACATGCTCGA ATTCGGACAC
AATCACGCGC TGTTCCTGGT GAGCGCATTG CTCGGTGCGT TGATGGTGAT CTGCGCGGCG
CGGCTGGTAC AAAGCTGGGC GTGGCTGCAG TGGATCGGCC GTAATACCTT GCTGATTCTT
TGCACGCATA TGTTGGTGTT CTTTGTATTG TCCGGTGTTG CGGCATTGGC TGGTGGTTTC
GGCAGTGCGC GTCCGGGGCT CGGTTGGGCA GTGTTCGTCA CGTTGTTTGC ATTGGCCGCC
TGCGTGCCGC TGCGTTGGAT CTTGATGCGC TTCGCGCCAT GGACGCTGGG TGCGCGCCGG
GTGGTGGCAT GA
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| Protein sequence | MSVSATPASP SSLPAAGSQV ASTGRARDPR IDATKAIAIL LVVFCHAKGV PHGMTLFAYS
FHVPLFFLVS GWLAAGYASR DTGLTQTIAK QARSLLLPYV TFYLLGYAYW LLTRNVGEKA
ARWGSHPWWE PMVAMFTGIG PDLYVQPPLW FLPVMLVTLV SYMVLRRRMS PILIAVLALI
VAWLWMNWFP VQHVRIFFGL DVLPVSLCFY ALGALLIYVS PRLPTSLAGS ALATVVLALA
VAWLAEANGR IDVNMLEFGH NHALFLVSAL LGALMVICAA RLVQSWAWLQ WIGRNTLLIL
CTHMLVFFVL SGVAALAGGF GSARPGLGWA VFVTLFALAA CVPLRWILMR FAPWTLGARR
VVA
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