| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01363 |
|---|
| Symbol | |
|---|
| ID | 6306949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 3541969 |
|---|
| End bp | 3543570 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642640696 |
|---|
| Product | phage terminase, ATPase subunit |
|---|
| Protein accession | YP_001914548 |
|---|
| Protein GI | 188577619 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5484] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.35276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCGCA TCGGTGGTGC ACTGGAAGCG CGCCTTGTCG TGCTGATCAT GAAACCGGAA
AAATCCGGTG GCGACTTCAA AGAAATTGAT CTGCTGCATC GGCAGTTGGA GCGCCAGGCG
CGCATCCAGC GCTACCAAGG CGGCGGCAAC GAAGCCGACT TGAATCCGGC CGTGGCGAAT
CGCAACGCCG CGCCGAAAAA GAAGCCCAAG CGCAACGACT TCACTGAGGA ACAGGTCGAG
CAGCTGACCA CGGCATTCAT CGACGGCTGC TTCGACTATC AGCGCGATTG GTACCGGGCC
AGCAACGAGC GTACCCGCGT CATCCTGAAG TCGCGTCAGA TCGGTGCGAC GTTTTACTTC
GCCCGTGAGG CGCTGATCGA TGCGCTCACC ACCGGGCGCA ATCAGATCTT CCTCAGCGCA
TCCAAGGCAC AGGCGCATCT GTTCCGTGGC TACATGCAGC AGTTCGTGCG CGAGACGATC
GACGAGACGC TCTCCGGCGG CGACAGCATC GTGTTTCCCA ACGGCGCCGA GCTGTTCTTC
CTGGGAACCA ATGCGCGCAC CGCGCAGGGT TACCACGGCA ATTTCTACTT CGACGAGTTC
TTCTGGACCT ATGGGTTCAA CGAATTGAAC AAGGTCGCCA GCGGCATGGC GATGCACAAG
AAGTGGCGCA AGACCTACTT CAGCACGCCA TCCAGCATGG CCCATGAGGC CTACACCTTC
TGGACCGGCG AGCGCCGCAA CAAGGGCAAA CCGGCCGCAC AGCGCATCCA GATCGATGTC
TCGCACGATG CATTGGCCGG CGGGCGCCGC TGCCAGGACC GCGCCTGGCG GCAGATCGTC
AACATCCTCG ACGCGCAGCG CCGTGGCTGC GACCTGTTCG ACATCGACGA GCTGCGCGAG
GAATACAGCC CGGACGCGTT CGCCAACCTG TTGATGTGCG ACTTCGTCGA CGACGGCGCC
AGCATCTTCC CGTTGGCGAT GCTGCAGCCG TGCATGGTCG ACAGCTGGGT CGAGTGGGGC
CAGGACTACA AACCGTTCGC CGTGCGCCCC TACGGCGATC GCGCCGTGTG GATCGGCTAC
GACCCCGCTG AGACGGGAGA TACCGCCGGA CTGGTTGTGT TGGCACCACC GCAGCAGCCC
GGCGGCAAGT TCCGGCTGTT GGAGCGGATC CAGTTCCGGG GCATGGACTT TGCCAAGCAG
GCAGCCGAGA TCGAGCGCAT CACGCGCCGC TACTGGGTGA CCTACATCGG CATCGACACC
ACCGGCATGG GCAGCGGTGT GGCGCAGTTG GTGAAGCAGT TCTTCCCGAA TCTGGTCACC
TTCAGCTACT CGCCTGAAGT GAAGACACGC CTGGTGCTCA AGGCGTTCGA CGTTATCCAC
AACGGGCGGC TGGAGTTCGA CGCCGGCTGG ACCGACGTGG CGCAGTCGTT GATGGCCATC
CGCAAGACCA TGACGGCCAG TGGCCGGCAG TCCACCTTCA GCGCTGGCCG CTCGGAAGAG
ACCGGCCACG CGGACCTGGC GTGGGCACTG TTCCACGCGC TGCAGAACGA ACCGCTGGAA
GGGCGCACCG CGCGCAACTC CGGCTTCATG GAGATCTCTT GA
|
|---|
| Protein sequence | MERIGGALEA RLVVLIMKPE KSGGDFKEID LLHRQLERQA RIQRYQGGGN EADLNPAVAN
RNAAPKKKPK RNDFTEEQVE QLTTAFIDGC FDYQRDWYRA SNERTRVILK SRQIGATFYF
AREALIDALT TGRNQIFLSA SKAQAHLFRG YMQQFVRETI DETLSGGDSI VFPNGAELFF
LGTNARTAQG YHGNFYFDEF FWTYGFNELN KVASGMAMHK KWRKTYFSTP SSMAHEAYTF
WTGERRNKGK PAAQRIQIDV SHDALAGGRR CQDRAWRQIV NILDAQRRGC DLFDIDELRE
EYSPDAFANL LMCDFVDDGA SIFPLAMLQP CMVDSWVEWG QDYKPFAVRP YGDRAVWIGY
DPAETGDTAG LVVLAPPQQP GGKFRLLERI QFRGMDFAKQ AAEIERITRR YWVTYIGIDT
TGMGSGVAQL VKQFFPNLVT FSYSPEVKTR LVLKAFDVIH NGRLEFDAGW TDVAQSLMAI
RKTMTASGRQ STFSAGRSEE TGHADLAWAL FHALQNEPLE GRTARNSGFM EIS
|
|---|
| |