| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01322 |
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| Symbol | |
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| ID | 6306993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3576850 |
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| End bp | 3578016 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642640740 |
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| Product | prepilin-type N-terminal cleavage/methylation domain protein |
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| Protein accession | YP_001914591 |
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| Protein GI | 188577662 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.421524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGGC GTTTTTCTAA CCAACGCACT GCTGCCGGCA TCAGCTTGGT GGAGATGATG
ATCGCGATGG TCATCGGCCT GGTGCTGATG CTGGGAGTCA TCCAGGTCTT TTCTGCGTCG
CGTACCGCGT CGATGTTGGC CGAAGGTAGT GCGCGTGCGC AGGAAAACGG ACGTTTCGCG
ATGGATTTCC TCCAGCGCGA CATTCGCATG GCCGGGCATT TCGGGTGCGT CAACGACCAG
GCTCATTTTG TGCGCGGGGA AGGGGATCCG GCCATCAATA CCGGTGCGGT CAGTGGTTCA
GGTCATCCGC TGGATTTCAG CATTAGCGTG CAAGGCTACG AGGCGCCTAA CACCAAGCCG
CCCGGCACGC TGACCCTCGG AGATACCTGG GCAGTGCCGG TGAATCTGCC CGCTGCGATT
ACCAAACTCA ATCCTCGCGG TGGCAGCGAT ATCTTGGTGT TGCGTTACCT GGCCCCGGAA
GGCGTGCCGA TCAAGGCGTT GACCACAGGC AGCGATAGCG TCGTGGGCTT TGATGCCACC
GCCGGACTGC GTTTGACAGA AGGGGGGCAA GCGGCACCGA ACGTGTTCGG AGTTGCGGAC
TGCGATCATG CCACGGTGTT CAAAGGCACC TATGTCAGCG GCAAGGTCAC TGCCACCGGG
ACCAATTTGT CCAATTACTC CACACGCCCA AGCGGACAGA CCATGCTCTA CCGCGCCGAG
TCGCTGGTGT ATTACGTCGG CACATCTGCG ACTTCAGGCG AGCCTGCACT GATGCGCGCA
CGGTCCAATG GCGTTGACGA TTACGGCACG CCGGAAGAGC TGGTCGAAGG GATCGAGAAC
ATGCAGTTGT TGTTCGGGCT CGATCAGACT GCAAACATAT CCAATACCTC GCCACCGTTG
GGAAACATCA GCACCCAGGC GATCGCGAGC GACGTCTCTA TTAACACCGA TTCCACCGCG
GCGGGGCAGT GGAGACGGGT CGGGCAAGTT CAGGTTGGCA TCCTGGCACG CAGTCCCGCA
CGTTCTACCG CCGAAGGCCC GGCAACTGCG TTGAGTTATC CCAGTGCGTT GGGCGTCTCG
TTTGCGCCGC CCACCCAGAC GGATGGCCGT TACCGAATGA CGTACGAATC CACGATCGCC
TTACGCAATC GCCTGTTCGG GAATTGA
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| Protein sequence | MTRRFSNQRT AAGISLVEMM IAMVIGLVLM LGVIQVFSAS RTASMLAEGS ARAQENGRFA
MDFLQRDIRM AGHFGCVNDQ AHFVRGEGDP AINTGAVSGS GHPLDFSISV QGYEAPNTKP
PGTLTLGDTW AVPVNLPAAI TKLNPRGGSD ILVLRYLAPE GVPIKALTTG SDSVVGFDAT
AGLRLTEGGQ AAPNVFGVAD CDHATVFKGT YVSGKVTATG TNLSNYSTRP SGQTMLYRAE
SLVYYVGTSA TSGEPALMRA RSNGVDDYGT PEELVEGIEN MQLLFGLDQT ANISNTSPPL
GNISTQAIAS DVSINTDSTA AGQWRRVGQV QVGILARSPA RSTAEGPATA LSYPSALGVS
FAPPTQTDGR YRMTYESTIA LRNRLFGN
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