Gene PXO_01321 details

Gene Information

• Locus tag: PXO_01321
• Symbol: pilV
• ID: 6306994
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 3578013
• End bp: 3578429
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 642640741
• Product: type IV pilus modification protein PilV
• Protein accession: YP_001914592
• Protein GI: 188577663
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4967] Tfp pilus assembly protein PilV
• TIGRFAM ID: [TIGR02523] type IV pilus modification protein PilV

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.539325
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTGATAG CTATCGTCGT TCTCGCATTT GGCCTGCTCG GCTTTGCGCT GTTGCAGACG 
GCGAATGTGC GGTTCGTGCA GAGTTCCAAC TACCGCACCC AGGCGACCAA CCTGGCGTAT 
GACTTGATGG ACCAGATGCG AAGCAACCGC TTCCAGTCTG CCTGGTATAC CGATGCCACC 
TTTTCCGCAA ACACTGTGAC TGCAGCCAGC TGCAGTCGGC CTCTCGGGAG CGTGGCCATC 
GCTGACAATA TCTCGCGTTG GAAATGCCAG GTCGTGCGCG CATTGGGCGA AGGCGCCAGT 
GCAACCGTTC TCAATAATAA CGGCCAGGTC ACCGTTGGCA TCAGTTGGGG GGATCAGCGT 
TGGGATGCCA ATAATCCCAA CGCCCAGACT ACCTTCACCC TGGTATCGCA GCTATGA 

 

Protein sequence

MLIAIVVLAF GLLGFALLQT ANVRFVQSSN YRTQATNLAY DLMDQMRSNR FQSAWYTDAT 
FSANTVTAAS CSRPLGSVAI ADNISRWKCQ VVRALGEGAS ATVLNNNGQV TVGISWGDQR 
WDANNPNAQT TFTLVSQL