Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01153 |
Symbol | |
ID | 6306457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3017537 |
End bp | 3018388 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642640212 |
Product | transcriptional regulator |
Protein accession | YP_001914069 |
Protein GI | 188577140 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.593212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATCG AAAACTCGCC AACCCGGATC GACGCATTGC CACCGGGCGT GCGCACCAGC TTCGAAAAGG CCGATGGCCC GGTGCTGATC GCGTTCCTGG CCGAGTTGCG CGAGGTCTGG GCGCCAGAAA CCGTTTGGCA CGCGCATGTC CGCGGCCAGC TGATGTATGT GGAACACGGC ATGCTCACCG TGCATACCGA ACAAGGCACC TTGTCGCTGC CGCCAGGCTG CGCGGGCTGG TTGCCGCCCG GACGGCAGCA CACGGTCGAG CCGGCCGGGC CCATGCGCGG CTGGGGCGTG GGGGTGCGGC CCGATGCCTG CGTCACCCTG CCTGCGCAAG GCCGGGTGAT CCGACTGACC GGCTTGGCCC GCGAGGCCAT CATGCGGGCC GCCAGCTGGC CGCTGGATCA GCCGTTGGAT GCCGCCCAGC AACGCCTAGC CGCGGTGTTG CTGGAGGAGC TGCGGCAGGT GCAGATCGAC CACCTGCACC TGCCGATGCC GGCCGACCGC CGGCTGCTGC GGATCGCCCG CCAGCTGCTC GACACCCCCG CCGACCCGCG TTCACTGGAG CAATGGGCCG ACTGGGGCGG ACTGTCGCCG CGCAGCCTGA GCCGGCATTT CCGCAACGAG ACCGGCCTGA GTTTTGCGCA GTGGCGACAG CAGGCCCGGC TGGCGGAAGG CTTGCGGCGG CTGAGCCAGG GCAACGCAGT GGCGCAGGTG GCCGACCAAC TCGGCTACAG CAGCCCCAGC GCCTTCGTCA GTGTGTTCCA CCGCCATTTC GGCGCCCCGC CGGCGCGTTA TTTCGCCAGC TCCCACGCGC GCGGCTTGGC ATCCACCGCC GCATCCGGAT AA
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Protein sequence | MSIENSPTRI DALPPGVRTS FEKADGPVLI AFLAELREVW APETVWHAHV RGQLMYVEHG MLTVHTEQGT LSLPPGCAGW LPPGRQHTVE PAGPMRGWGV GVRPDACVTL PAQGRVIRLT GLAREAIMRA ASWPLDQPLD AAQQRLAAVL LEELRQVQID HLHLPMPADR RLLRIARQLL DTPADPRSLE QWADWGGLSP RSLSRHFRNE TGLSFAQWRQ QARLAEGLRR LSQGNAVAQV ADQLGYSSPS AFVSVFHRHF GAPPARYFAS SHARGLASTA ASG
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