| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00884 |
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| Symbol | |
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| ID | 6305954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2481889 |
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| End bp | 2483109 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642639718 |
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| Product | pheromone shutdown protein |
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| Protein accession | YP_001913578 |
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| Protein GI | 188576649 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0178153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGC AGACCACCCA CGTTCTGGAC GATGCGCTGT CCGGCCAGCC GCACCGCATC
GTCGAACGCG ATGGCGTGCG CTATACCTTG CTCGGCACCG CGCATGTGTC GCTGGCCAGC
GTGGCCGCCG TGCAACGCGC GATCGGCAGC GGGCGCTACG ACGCGGTGGC GGTGGAACTG
GATGCGCAGC GCCTGCAGGC GCTCAGCGAC CCGGACGCCC TCGCCCGCCT GGATCTGGTG
CAGGTGATCC GCAAAGGCCG TGTGGCCTTG TTCGCGGCGA ATTTGGCGCT TGCCGCGTAC
CAACGCCGCT TGGCCAAGCA ACTCGACATC GATCCGGGTG CAGAACTGAA AGAGGCGGTG
AACCTGGCAC GTGCGCAGGG CTTGCCGGTG CATCTGATCG ATCGCGAGGT TGGCCTGACC
TTCAAGCGTG CGTCCGGGCG CCTGGGATTC TTCGGCAAGA TGAAACTGGC CGGCGGATTG
CTCGGCGGCC TGTTCGCTGC CGATGAAGTG GGCGAAGAGG AAATCGAAAA GCTCAAGCAA
GGCGACATGC TGGAAGCGAG CTTCGGCGAT TTCGCCAGCG AAAGTCCGGA GCTCTACGAG
ACGGTGATTG CCGAGCGCGA TCAGTACATG GCCACGCGTC TGCGCGAAGA AGTCGGCGCA
GATCAGCGCG AGATCCTGGC AGTGGTCGGC GCCGGGCATC TGGCCGGTCT TGCGCGCCAT
CTGGAACAGG ACACCGCCGC GCCCGGCCCG CTGCGCGAAT CGCTGGAGTA CGTGCAGCAA
CGCAAGCGTA TCCCGTGGAT CACGCTGGGC ATCCTGGCGG TCATCATCAC CGGCATCGGC
ATCGGGTTCT GGCGCGGTGG CCTGAGCATG GGCGCCGATC TGTTGCTGCA GTGGGCGATG
TACACCGGCG GCATGGCTGC ATTGGGCTGC TTGCTGGCCG GCAGCCACCC GTTAAGCATT
CTCACCGCTG CCGTCGTGGC GCCGTTCAAG CCGTTCCGCC TGAGCGTGCC AACAGGTGCA
TTTGCGGCAC TGGTCGAAGT GCACATGCGC AAGCCGGCCT ATGGCGATTT CCTATCGCTG
CGCGACGATG CGCAGACGCT GCGTGGCTGG TACCGCAATC GCGTCTCACG CGTGGTGCTG
ACATTTCTGC TGACCAATTT CGGCAGCATG GCCGGTGTAT GGCTGGCCGG CGTGCAGATC
TTCAACCGCC TGCACGGTTG A
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| Protein sequence | MTEQTTHVLD DALSGQPHRI VERDGVRYTL LGTAHVSLAS VAAVQRAIGS GRYDAVAVEL
DAQRLQALSD PDALARLDLV QVIRKGRVAL FAANLALAAY QRRLAKQLDI DPGAELKEAV
NLARAQGLPV HLIDREVGLT FKRASGRLGF FGKMKLAGGL LGGLFAADEV GEEEIEKLKQ
GDMLEASFGD FASESPELYE TVIAERDQYM ATRLREEVGA DQREILAVVG AGHLAGLARH
LEQDTAAPGP LRESLEYVQQ RKRIPWITLG ILAVIITGIG IGFWRGGLSM GADLLLQWAM
YTGGMAALGC LLAGSHPLSI LTAAVVAPFK PFRLSVPTGA FAALVEVHMR KPAYGDFLSL
RDDAQTLRGW YRNRVSRVVL TFLLTNFGSM AGVWLAGVQI FNRLHG
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