Gene PXO_00577 details

Gene Information

• Locus tag: PXO_00577
• Symbol: rhsS
• ID: 6305820
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 2349018
• End bp: 2351069
• Gene Length: 2052 bp
• Protein Length: 683 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642639586
• Product: RhsD protein
• Protein accession: YP_001913447
• Protein GI: 188576518
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3209] Rhs family protein
• TIGRFAM ID: [TIGR01643] YD repeat (two copies)

Plasmid Coverage information

• Num covering plasmid clones: 44
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTCACCG GAACCAAGCT CGAAACGGCG GCCGACTACC GTGCGCCGGC AGGGCATCTG 
GAATTCATCC GGTATTACAG CAGTGCCGTC GGCCTGCAAC CCACCAGCGT GCTCGGCAAC 
ACCTGGCGCC ATAGCTACGT CCGGACCATC ACCGTCGCCG ATGCATCGAC GCTGATCCTG 
ACGCGTCCCA ACGGTAACTT CTACACGTTC AAGAAGTCCG CCAATGGCAC CTGGACACCG 
GACTGGGATG TGCGCGAAAC GCTGTCCGAA GTGCAAGACA ACGGGACGCT GACCGGATGG 
CAGGTGACTG CCATCGACGA CAGCAAAGAG CAGTTCGATC TGGACGGCAA GCTGACCGGC 
ATCAGCTATA CCGATGGCGA GCAACTCACC CTGACTTACG CCGGCCGCCA GTTGCAATCG 
GTGACGGATA CGCGTGGCCG TCGCCTGCTA TTTGCCTACC AGGCAGGCAG GATCGCACAA 
ATCGGACTCC CCGATGGAAT GGTGCTGGCC TACGGCTACG ACCCTCAGGC GCGATTGAGG 
TCGGTGACCT TGCAGACAGC TGCCGGAGCG GTGGCGTCGG CTATCGCCGG GTATGACTAT 
GGCGATGCGC GCTTTCCGGA CGCCTTGACC ACCCACCGCG ATGAGCAGGG CCAGGTGTAT 
GCCTCGTGGA GCTACGATGC GCAGCAACGC GTCGTCCGCA GCGTGCACGG CGATCCGGCC 
GGCAAGATCG ACGAGGCCAC TATTGCCTAC TCGGGGAACA CTTCCACCGT CTCCAATGCG 
CTTGGCAATG CAGTAACGCG CACTGGCATC TCCAAGCTTG GCCAGGCCAA GGTCACCGCC 
GTCCAGGGCT TGTGCCCCGA ATGCACGGTT GGGGCGTTCC AGTCGCGCAG CTACGACGGC 
AACGGCTACC CCGACCAGGA AGTCGATTTT GCAGGCGTCG CCACCGATTG GAGGTACAAC 
AACCGTGCCT TGTTGGCCAG CAAGATCGAA GCGGCCAACA GCAGCAGCGG CCAGAAGCGC 
ACGCTGCAGA CGGACTGGCA CCCCAGCTTC CGTGTTCCCA CCGACCGGCG CACCTACGAT 
GCCAATGATG TCCTGGTCGC AAGGACGGGC TGGACCTACA ACACCAGGGG TCAGGCACTG 
ACCGTATCGC GGACGGATCC AAGTGGAGGT CCTACCCGCG TCACCACCCA GCGCTACTGC 
GAAGACAGCG ATGTTGCCGC CGGCAATTGT CCCTTGCCCG GCTTGATGCT GGCCAGCGAT 
GGCCCACGCA CGGATATCGC GGACAGCACC AGCTACAGCT ATTACCTTGC CGACGACGCC 
AGTTGCGCGG CATCGCCGAG CTCCTGTCCG CACCACAAAG GCGACCTCTG GAAGATCACC 
AACGCCCTCG GCCAGACCAC CGAATACCTT GCCTATGACG GTGCGGGTCG TCCGTTGTCG 
GTCAAGGACG CCAATGGCAT CGTCACCGAC TACAGCTACC ACCCGCGCGG TTGGTTGACG 
GCCACCAAGG TGCGCGGCAC CGATGCGTCC AGCGAGGCCG ACGATCGCAT CACCCGCATC 
GATTACTGGC CCACCGGGCT GGTCAAGCAG GTGACCCAGC CCGATGGCGC GTTCACGGCG 
TTCACCTACG ACACCGCGCA TCGCCTGACC GACATTGCCG ACAACGCGGG CAACCGCGTG 
CATTACACGC TGGACAATGC CGGCAACCGC GTCAAGGAAG ACACCCGCGA TGCATCGGGC 
ACCTTGAAGC GCACGCTCTC GCGCATCTAC AACCAGCTGA GCCAGCTCAA GACGCAGGCC 
ACCGCGGCCG GCGACCCCAC CGATTTCGCT TACGACGCCA ATGGCAACAC CACGTCCGTC 
ACCGATGCGC TCGGCACCGC CACCCAGAGC GACTACGACC CGCTGAACCG CCTCTCGCAG 
ACGCTGCAGG ATGTGGCCGG TATAAAGGCC GGTACCCGCT TCGACTCGAC GCACAGGACA 
ACCTCACCAA GGTCACCGAC CCCAAGGGAC TGGACACCAC CTACGACTAC AACGGCTTCG 
GTGACCTGGT GA 

 

Protein sequence

MFTGTKLETA ADYRAPAGHL EFIRYYSSAV GLQPTSVLGN TWRHSYVRTI TVADASTLIL 
TRPNGNFYTF KKSANGTWTP DWDVRETLSE VQDNGTLTGW QVTAIDDSKE QFDLDGKLTG 
ISYTDGEQLT LTYAGRQLQS VTDTRGRRLL FAYQAGRIAQ IGLPDGMVLA YGYDPQARLR 
SVTLQTAAGA VASAIAGYDY GDARFPDALT THRDEQGQVY ASWSYDAQQR VVRSVHGDPA 
GKIDEATIAY SGNTSTVSNA LGNAVTRTGI SKLGQAKVTA VQGLCPECTV GAFQSRSYDG 
NGYPDQEVDF AGVATDWRYN NRALLASKIE AANSSSGQKR TLQTDWHPSF RVPTDRRTYD 
ANDVLVARTG WTYNTRGQAL TVSRTDPSGG PTRVTTQRYC EDSDVAAGNC PLPGLMLASD 
GPRTDIADST SYSYYLADDA SCAASPSSCP HHKGDLWKIT NALGQTTEYL AYDGAGRPLS 
VKDANGIVTD YSYHPRGWLT ATKVRGTDAS SEADDRITRI DYWPTGLVKQ VTQPDGAFTA 
FTYDTAHRLT DIADNAGNRV HYTLDNAGNR VKEDTRDASG TLKRTLSRIY NQLSQLKTQA 
TAAGDPTDFA YDANGNTTSV TDALGTATQS DYDPLNRLSQ TLQDVAGIKA GTRFDSTHRT 
TSPRSPTPRD WTPPTTTTAS VTW