Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00565 |
Symbol | |
ID | 6305833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2363865 |
End bp | 2364518 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642639599 |
Product | pectate lyase L |
Protein accession | YP_001913460 |
Protein GI | 188576531 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTGCACT TGACTCTTGA GACCGCCCTT CGACCTGATC AATGCCGCTG CCGCAGTCAC CCTGCAACAC AACTGGTCGT TCTACAACGG GTACACAGCG CATTCACCCC GCTGGGCAAT GGCGCAGGCT TCAAGGCAGG CGGCTACGGC CGCAACGGAA GCGATTATCC CAAGCCGGTG CCGCGCCATA TCGTGCAGTT CAATCCGGCA GTGGGCAATC GATCCAACGG CCTCTACGCC AATCACCACA TAGGTGGGCA GGAGTGGATC AGCAACACAT CGATCAAGAA CGGCCGCGCC AACTACGACA TGCAGTCCAC CCTGAGCAAC AACGTCACTG ACGTGTCGGG ATACGACCAC CATCTGGCCA ATAACCTGGG ATTCGGAACG CGCATCGAAA TGATCAACCT GGGGTCTGCG AGCGAGAACG ATATCGGCCG CAATTCGTTC AATCTTCTCC TTGTGGTCAG TGCGGGCGAT TTCGTCAGCC TGGACGAGAG CCAGCTCATG CGTCCGCGCC AGGCCAACGG CGACCTACCC ATCATCACCT TCGCCACCCT GGCACCGGGC AGCGCGTTGA TCGACGCCGG CGCCGATACC GGTGAGCCCT TCAACGGGCT TGCACCGGAC CTGGGGGCAA TCGAGGCCCG TTGA
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Protein sequence | MLHLTLETAL RPDQCRCRSH PATQLVVLQR VHSAFTPLGN GAGFKAGGYG RNGSDYPKPV PRHIVQFNPA VGNRSNGLYA NHHIGGQEWI SNTSIKNGRA NYDMQSTLSN NVTDVSGYDH HLANNLGFGT RIEMINLGSA SENDIGRNSF NLLLVVSAGD FVSLDESQLM RPRQANGDLP IITFATLAPG SALIDAGADT GEPFNGLAPD LGAIEAR
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