| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00068 |
|---|
| Symbol | rpfF |
|---|
| ID | 6305282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1793513 |
|---|
| End bp | 1794382 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642639053 |
|---|
| Product | enoyl-CoA hydratase |
|---|
| Protein accession | YP_001912926 |
|---|
| Protein GI | 188575997 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.279285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCAG TTCAACCCTT CATTCGCACC AATATTGACT CAACCCTACG CATCATTGAA
GAACCGCAGC GTGAGGTGTA CTGGATCCAT ATGCATGCCG ATCTTTCAGT CAACCCGGGG
CGCGCCTGCT TCTCGACGCG CCTAGTCGAC GACATCACCC GCTATCAGAC CAACCTGGGG
CAGCGCCTGA CCGACGCAGG CGTGCTGGCA CCGCACGTGG TGTTGGCGTC CGACAGTGAC
GTGTTCAACC TGGGCGGCGA CCTGGCCTTG TTTTGCCGAC TCATTCGCGA AGGCGACCGA
GTTCGACTGC TTGATTACGC CCAACGCTGT GTGCGCGGTG TACATGCCTT CCATGTCGGA
CTCGGCGCAC GTGCGCACAG CATTGCCCTG GTGCAGGGCA ATGCGCTTGG CGGCGGATTT
GAAGCTGCAT TGAGCTGCCA CACCATCATC GCCGAGGAAG GCGTGATGAT GGGCTTGCCC
GAAGTGCTGT TCGACCTGTT TCCGGGGATG GGCGCCTACT CTTTCATGTG CCAGCGCGTC
AGTGCGCAAC TGGCGCAAAA GATCATGCTT GAAGGCAATC TGTACTCCGC CGAGCAGTTG
CTTGGCATGG GTCTGGTTGA TCGCGTGGTG CCGCGCGGCC AGGGCGTGGC CGCAGTCGAA
CAGGTGATCC GCGAAAGCAA GCGCACGCCG CATGCCTGGG CGGCGATGCA GCAGGTGCGC
GAAATGACCA CCGCAGTACC ATTGGACGAG ATGATGCGCA TCACCGAAAT CTGGGTCGAT
ACGGCGATGC AGTTAGGCGA GAAGTCGTTG CGCACCATGG ATCGCCTGGT CCGCGCGCAA
TCGCGTCGCT CCGGGCTTGA CGCCGGCTGA
|
|---|
| Protein sequence | MSAVQPFIRT NIDSTLRIIE EPQREVYWIH MHADLSVNPG RACFSTRLVD DITRYQTNLG
QRLTDAGVLA PHVVLASDSD VFNLGGDLAL FCRLIREGDR VRLLDYAQRC VRGVHAFHVG
LGARAHSIAL VQGNALGGGF EAALSCHTII AEEGVMMGLP EVLFDLFPGM GAYSFMCQRV
SAQLAQKIML EGNLYSAEQL LGMGLVDRVV PRGQGVAAVE QVIRESKRTP HAWAAMQQVR
EMTTAVPLDE MMRITEIWVD TAMQLGEKSL RTMDRLVRAQ SRRSGLDAG
|
|---|
| |