| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_5008 |
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| Symbol | |
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| ID | 6289893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010683 |
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| Strand | - |
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| Start bp | 55802 |
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| End bp | 56755 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642627402 |
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| Product | Conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_001901368 |
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| Protein GI | 187930882 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 0.116389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGC TACCTCGCGC CATTCTCATC ATTGCTGCGA TGGCAACGCA TGCCGCATCG
GTCTATGCCG ATGTCCCTGC AGCCGCTCCT CGCCCCCAGG GCGAGTTCGG CCGCATGTCG
AAGGTTGCGC CGGCAGCTCG CGCGGCGTCG CCCTGCGCCA AGTCTTCTGC TTTCGGCCCC
TTTGCTGAGC AGCAAGACCC GACGCTTGCG ACCTACGCCT ACGACGCGGA TTACACATAT
CCGATTCCGA TGCGGCCCAA TCAGCAGACG CACCTGGTGC TGGGTGACGA CGAGACGTTG
GTGTCGTTCA CGCTCGGCGA CCGAAACAAG AAGCTCTGGC CAACGATGCC ATCGGTCACC
AAGCGCGACC TCTTCATCGT GCCGGCTGCA GCTGGACAGC GCGCGGCCGC GACGATCATC
ACGTCGAAAC GACGCTACGA GCTTCAACTG TGCTCGGGTG ACGACGGCCC GGCATATCAA
CGTGTGAGTT GGCAATACAC AGACACGTTG GCCGATGGTG TCGGCGCGAG CCCGACGGCA
TTCGGTTTCG AGATGGCGGC TACGCCTGGT GTACCAGGTC GCCCAGAAGC GGGAGGCTCG
AAAACGGGGA GCCCGCGCAT CGACGCGACG CGCATGAACA CGAACTACCG CATCGAGGGC
AACGCCGAGT TCAAGCCGGT GATGGTGTTC GACGATGGCC GCATGACGTA TTACCAACTG
CCGCACGACG CCAAGCTGTC GGCCGTGTTC ATCCTGGACA AGGATGGCCA GGGTGAAATG
GCGCGCGTGA TTCCGCTCGG CAACGACATG TACCAGATCC AGGAGGTTGT CACGTACGGC
GCGCTGCTCA AGCGAGGCAA GGACGAGGTG CGGATCTTCA ATGGCAAGGG GTCAGGCTGT
GGTTTCTTCA GCTGCGATAC TAAGCCTGTG AAGAACATCG ATGGGGGCGC TTGA
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| Protein sequence | MKTLPRAILI IAAMATHAAS VYADVPAAAP RPQGEFGRMS KVAPAARAAS PCAKSSAFGP
FAEQQDPTLA TYAYDADYTY PIPMRPNQQT HLVLGDDETL VSFTLGDRNK KLWPTMPSVT
KRDLFIVPAA AGQRAAATII TSKRRYELQL CSGDDGPAYQ RVSWQYTDTL ADGVGASPTA
FGFEMAATPG VPGRPEAGGS KTGSPRIDAT RMNTNYRIEG NAEFKPVMVF DDGRMTYYQL
PHDAKLSAVF ILDKDGQGEM ARVIPLGNDM YQIQEVVTYG ALLKRGKDEV RIFNGKGSGC
GFFSCDTKPV KNIDGGA
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